| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0508 |
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| Symbol | |
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| ID | 5668927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 589386 |
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| End bp | 591407 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239437 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001504875 |
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| Protein GI | 158312367 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.663118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAG TATCAGGTGA TGCCCGGCAC GTCGGCGCGG GGAGCTGGGC CGGTGAACAT
GTCGGTGATG TTGAGGCCGC GGTGCTGCTC GACACGTTGA GCGAGGTGGT GTTCCGCACC
GACGCGGAAG GCCGCTGGAC GTATCTCAAC CGGGCGTGGA CGAGGCTGAC CGGCTTCGAG
ATCGGCCCCA GTCTCGGTGC CCGATTCCTG GACTACGTCC ATCCCGACGA ACTGGAGTAC
ACGGTCGCCC TGTTCATGGG GGTGGTCGCC GGTGGCGCCG ACCACTGCCA CCACGAGACC
CGGTACCGCA CCCGTGACGG CAGCTACCGC CGCGTGCAGA TCAGGGCGAA CGTGATCCGG
GACGGGGACG GCGAGGTGAT CGGTAACACC GGGACGATCG TGGATGTCAC TGACTCCCGT
CGCGGCAGCG AGACGATCGG GGAACACGTC GCCCTGCTCG AACTCGTCTC GGCGGACGCA
CCGGGCGGCG AGCTGCCGGT GGGGGTGGTC GTGTACGACG CTGACCTGCG GCTACGGCGA
GGCTCACCGG TCATCGATCG GCTGGCCGGC GCACCGCAGC GCATCGGTGA CCCCCTCGCC
CGGCTCGTGG AGCGCCTGGC GCCGGCCGAC CCGAGACAAC GCGCCCTGGG CGGCGAATGG
GGGCTGATCG CGGTCGCGAG ACGCACCAAC CACGCCCAGG TCAGCGACCT CGACCTTGCC
GATCCCAGCC GGTCGCTACG GGTATCGGTA ATCCCCTATC TGCGGGACGG GGAGGAGATG
CTCGCGCTCG TCCTGGCCGA CATCACCGAC CTGCGTCGCG CCGAACATCG CCAAGCAGCC
CTGGCCCGGC TCGGCCACCG GGCCATCTCC AGCTCCGACA CCGCCGCGCT GGTGAGTGAA
GCCGCCGGGA TGGTCACCTC GACACTCGAC GTCGCCGGCT GCAAGCTGAT CCACCTCGAC
CCGCGAGGCG GCGACGCAGC CGGCACGAGC CCGCTGCTTG ACCGGGTCCT GACCGACGAC
CAGCCGGTGA TGATCGACAG TCCGGTCAGC GACCTGGCTC GCTGCCTGGC GGGATCCCCG
CCAGGCAGCG ATGTCGCCAC CGTGCTCGCC ACGCGCGTCG GCGGCGCAGG GCTACTGTTC
GGTGTCCTCG CCGCCCACAG CACGACCCCG CGTCACTTCA CCGACGACGA GATCCAGTTC
GTCCAAGCAG TGGCCGACAT CCTCACCGCA GCCCTCGAAC GCGACCGCAC CGACCACGAA
CTGCGCAGAC TCTACCGGCG GGCGGAACAC AGCAAAGCGT GGCTGGCAGC GAGCGCGCAC
ACCATCACCC GGGTCATCGC CGCCACCGAG CCGCGCGACG CCCTCGACCT GATCGCAGCC
ACGGCGAGAA CGATGGCGGG CACCGACATC GGGGTGGTTG CCGTGCCCGA CGAGCACGGC
AACCTGGTGA TAACCACAGC CGACGTCGCC CCCGGCCTGC CAGCTGCTCC TGATTCCCTG
CTCGGGCTGA GCCTCACACA GGGCGTGACC CCGGTGGCCG AGCAGCTCAC GGCCGGTGGC
ACCGTCGTCC TCGACAGCCT CGATCTACGT GGCAGCAGGA TCTCCCCGGC GCCCAACATG
CCCATCGCCA CCGCACTGAT CCTCCCGCTA CGGATCACGC GGCGATCATC GGCCGTGCTC
ATCCTCGGAA ACCACACGGA CACAGCACGC CTCCCGCTCC ACGACATCGA GCTGATCGAG
GCGTTCGCCC ACGACGCCGC GCTCGCCGTC GAACTCATCC AGACCCAACA CGACCGGGCC
CGCCTCGCCG TCTTCCAGGA CCGCGACCGC ATCGCCCGCG ATCTGCACGA CCAGGTCATC
CAACGCCTCT TCGCGATCGG CCTGCACCTG CAGTCCCTGA CCCGAGCCGT CGGCGACATC
GCAGCAGCCC GACTGACCAG CGCCATCAAC GCCCTCGACC ACACCATCGA CGACATCCGC
CACACGATCT TCGACCTGCA CCCCATACAG CCAGGCCAAT AG
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| Protein sequence | MTSVSGDARH VGAGSWAGEH VGDVEAAVLL DTLSEVVFRT DAEGRWTYLN RAWTRLTGFE
IGPSLGARFL DYVHPDELEY TVALFMGVVA GGADHCHHET RYRTRDGSYR RVQIRANVIR
DGDGEVIGNT GTIVDVTDSR RGSETIGEHV ALLELVSADA PGGELPVGVV VYDADLRLRR
GSPVIDRLAG APQRIGDPLA RLVERLAPAD PRQRALGGEW GLIAVARRTN HAQVSDLDLA
DPSRSLRVSV IPYLRDGEEM LALVLADITD LRRAEHRQAA LARLGHRAIS SSDTAALVSE
AAGMVTSTLD VAGCKLIHLD PRGGDAAGTS PLLDRVLTDD QPVMIDSPVS DLARCLAGSP
PGSDVATVLA TRVGGAGLLF GVLAAHSTTP RHFTDDEIQF VQAVADILTA ALERDRTDHE
LRRLYRRAEH SKAWLAASAH TITRVIAATE PRDALDLIAA TARTMAGTDI GVVAVPDEHG
NLVITTADVA PGLPAAPDSL LGLSLTQGVT PVAEQLTAGG TVVLDSLDLR GSRISPAPNM
PIATALILPL RITRRSSAVL ILGNHTDTAR LPLHDIELIE AFAHDAALAV ELIQTQHDRA
RLAVFQDRDR IARDLHDQVI QRLFAIGLHL QSLTRAVGDI AAARLTSAIN ALDHTIDDIR
HTIFDLHPIQ PGQ
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