| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0409 |
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| Symbol | |
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| ID | 5668833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 487891 |
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| End bp | 488895 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641239342 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001504781 |
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| Protein GI | 158312273 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0717665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGA GCCCTGACCG CGATCGCCTG CGGCTGCTGA CCAAGGTGGC GCGCCTGTAC
CACGAACAGG GCGTCCGGCA ACCGGAGATC GCTGAACGGC TCAACCTGTC TCAGGCCCGT
GTCTCCCGGC TCCTCAAGGA GGCGTCCGAG CTGGGGATCG TCCGCACGAT CATCGTCCCG
CCGCCCGGCG TGCATGCCGA CATCGAGGAC GAGCTCATCC GGCGGTACGG GCTCCGGGAC
GTCATGGTGG TCGACGTCGA GGGCAGCGCG GGCGACATCA CGGCGGCTCT CGGTGCCAGC
GGCGCGACCT ATCTGGACAT GACGCTGCAG AACGACGACG TCATCGGCGT CTCGTCGTGG
AGCGCCACCT TGCTCGCCGC GGTCGACGCC ATGCGTCCCC GACACACCCT GAATGCCCGT
CAGGTCATCC AGCTGATGGG CGGCGTCGGT AGCCCCGACG CGCAGATGCA GGCGACCCGC
CTCACCGGGC GGCTCGCCAC ACTCACCGGA GCCGCTCCGC TGTTCGTGCC GTCGCCCGGC
CTGGTCGGGT CGGCCACACT CCAGCAGGCC CTGCTCACGG ACCCGGCGGT CCAGACGGTT
CGGGAAGTCT GGTCCGAGCT CACCGTGGCA CTGGTCGGCA TCGGCACCAC GACGCCCTCG
CCCCTGCTGC GCCAGAGCGG GAACGGGCTG TCCGACGCCG ACCAGCGGAC ACTGCGCGAC
GCCGGCGCGG TCGGGGACGT CTGCCTGCGG TACTTCGACG AGGCCGGACA GCCGGTCGTG
GCAGACCTCG ACCAGCGGAT CATCGGCATC GACCGGGAGA CGTTGCTCGG CACCGCGCGC
CGCATCGCCA TCGCCGGCGG GCAGGAAAAA GCGACCGCCA TCCGGGCGGC GGTGCTGGGC
CGCTGGGTGA ACATCCTCAT CACGGACCTC GGCGTAGCTG GCCACCTGCT CGGCGCGCCG
CCATCCGGGC CGTCAGCGGA CCGGGAGTCG GTCGACCACC GCTGA
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| Protein sequence | MRASPDRDRL RLLTKVARLY HEQGVRQPEI AERLNLSQAR VSRLLKEASE LGIVRTIIVP
PPGVHADIED ELIRRYGLRD VMVVDVEGSA GDITAALGAS GATYLDMTLQ NDDVIGVSSW
SATLLAAVDA MRPRHTLNAR QVIQLMGGVG SPDAQMQATR LTGRLATLTG AAPLFVPSPG
LVGSATLQQA LLTDPAVQTV REVWSELTVA LVGIGTTTPS PLLRQSGNGL SDADQRTLRD
AGAVGDVCLR YFDEAGQPVV ADLDQRIIGI DRETLLGTAR RIAIAGGQEK ATAIRAAVLG
RWVNILITDL GVAGHLLGAP PSGPSADRES VDHR
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