Gene Franean1_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0369 
Symbol 
ID5668793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp438959 
End bp440494 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content73% 
IMG OID641239301 
Productprotein serine/threonine phosphatase 
Protein accessionYP_001504741 
Protein GI158312233 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0013966 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00252542 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGACCTCA ACCCCCGGCA CGGGCAGGGC TACCCCGGGC ACGGCTATCC CCCCGAACGC 
CCGGACTCGC CGCACCCGAA TGCCGGCTAC GCCGAGAACT CCACCCACCC CGACGGATAC
CCAGGTGACG ATCTTCCGAC CGAGAGCTAC CGGGCGGAGG ACTTCCGAGC CGATGATCAG
CCTACCGAGA GCTACACGCC GGACCAGTTC ACCGGGTCGG CCTACCCGGA GAGCGGCTAC
GCCGACAACG GCTATGCGGA GAACTCCTAT CCGGACGGCG CCTATCCCGG CGCCGGCTAC
CCGGCGGGCA CGGGTGACTA CCGGGAAGGC GACTATCACC ACGAGTACCC CGAATCCGCG
TACTCCGAAC CTGGCTACCA GGGTGAGACG TACTCGGACG ACACCTATTC GGGCAGCGGA
TTCAACGAGG ACGGATACGC GGAGGACACC GATCCGGCCA CGATGCTCCT GGGCCAGCGC
GCCGTCCCGG GCGAGGCGGA CGACGACGCG CACGACGAGG TGATGCGCTG CCCGGTGTGC
GCGGCACCCA ACTACCAGGA CGCCCGGTAC TGCGAGGCCT GCGGTTTCGC CCTGACCGGC
GTCCCGGTGG CCGGCGGCGA CGAGGACCAC CGCGAGATCG ACCTCGGCCC GCTCGCCGGC
GTGTGTGACC GCGGCGTGCG GCATACCACC AACGAGGACT CGATGGGCGT GGCGATCGTC
CACGGCACGC TGATCGCGGT GGTCTGCGAC GGGGTCTCGA CGACCCCGGG CTCCGGGGAG
GCGTCCGCCG CCGCCGCGGC GACCGCGACG GCCATCCTCG CCGACGCGGT GCGCGCCCAC
GGGCCCGGCG AGGCCGTCCC GTATGACGAG CGGCCGGCGA GCCGGGCGAA CGACGTCCTC
GACGTTCTGG AGGAGTACTC CGAGTACGAC GAGCCGCGCA CCGCTCCGCG GCGGATCTCC
GGTGGTTTCG GCCCGGACGA GGCCGACATC GCCCTGCAGC GGGCCGTGGA GGCCGCCCAG
GCCACGATCG CCCAGCTCAG CGCGGCGGAG GGCCGGATGG CGCCGTCCTG CACCTTCGCG
GCGGCGATCA TCACGCCGCC GTCGGTGGAC GGTCCCGGCA TGGTGACCGT CGGCTGGGTC
GGCGACAGCC GCGTCTACCT GCTCGGCCCG CGCTGGTGCG AGCGGCTCAC CGCGGACGAC
ACCTGGGCGG CCGAGGCGGC CCGGGCCGGG CTCATCCCGG CGTCGGAGGC GGAGACCCAC
CGGCGCGCGC ACACACTGAC GCGCTGGCTC GGCGGCGACG CCGAGGACGT CACCCCGCAC
ACCGCCGCCT TCCCGATCGA GACCCCGGCC ACCGTGCTCG TCTGCAGTGA CGGCCTGTGG
AACTACTCCT CGCGCCCGGA CGTCCTCGCC GCGCTGGTGA ACCAGCTCGA GCCGAGCGCG
TCCGCGCTGG ACGTCTCCCG CCACCTCATC GACTTCGCCA TCGACCAGGG CGGGCACGAC
AACATCACCG TGGTCGCGGC GAGGGTGACG AGCTGA
 
Protein sequence
MDLNPRHGQG YPGHGYPPER PDSPHPNAGY AENSTHPDGY PGDDLPTESY RAEDFRADDQ 
PTESYTPDQF TGSAYPESGY ADNGYAENSY PDGAYPGAGY PAGTGDYREG DYHHEYPESA
YSEPGYQGET YSDDTYSGSG FNEDGYAEDT DPATMLLGQR AVPGEADDDA HDEVMRCPVC
AAPNYQDARY CEACGFALTG VPVAGGDEDH REIDLGPLAG VCDRGVRHTT NEDSMGVAIV
HGTLIAVVCD GVSTTPGSGE ASAAAAATAT AILADAVRAH GPGEAVPYDE RPASRANDVL
DVLEEYSEYD EPRTAPRRIS GGFGPDEADI ALQRAVEAAQ ATIAQLSAAE GRMAPSCTFA
AAIITPPSVD GPGMVTVGWV GDSRVYLLGP RWCERLTADD TWAAEAARAG LIPASEAETH
RRAHTLTRWL GGDAEDVTPH TAAFPIETPA TVLVCSDGLW NYSSRPDVLA ALVNQLEPSA
SALDVSRHLI DFAIDQGGHD NITVVAARVT S