Gene Franean1_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0355 
Symbol 
ID5668779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp423907 
End bp424683 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID641239287 
Productphosphate transporter ATP-binding protein 
Protein accessionYP_001504727 
Protein GI158312219 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.584479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0138641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC GTATCGACAT CTCCGGGCTG ACCGCCTACT ACGGGAAGTT CAAGGCCGTA 
GCCGACGTGA ACCTGACGAT CGAGCCCAAG ACCGTGACGG CCTTCATCGG CCCGTCCGGC
TGCGGGAAGT CGACCGTCCT GCGGACGCTC AACCGGATGC ACGAGGTCCT CCCCGGTGCC
CGGGTCGAGG GCAAGGTCCT GCTCGACGGG GAGGACCTGT ACGGACCCGG GGTCGACCCG
GTGAACGTCC GCCGCAACGT CGGCATGGTC TTCCAGCGGC CCAACCCGTT CCCCACGATG
TCGATCTACG AGAACGTCAT CGCCGGGCTG AAGCTGAACG GCGTCCGCAA GAAGGCGCTG
CTCGACGAGC GGGTCGAGGA GTCGCTGCGC GGCGCCAACC TGTGGGACGA GGTCAAGGAC
CGGCTCAACC GGCCCGGCGC CGGGCTGTCC GGAGGCCAGC AGCAGCGACT GTGCATCGCC
CGCGCGATCG CCGTCGAGCC GCAGGTGCTG CTCATGGACG AGCCGTGCTC CGCGCTCGAC
CCGATCTCCA CCCTCGCGAT CGAGGACCTG ATCCAGAAGC TCCGGTCCAG CTACACGATC
GTCATCGTCA CGCACAACAT GCAGCAGGCG TCCCGCGTGA GCGAGACGAC GGCCTTCTTC
TCCCTGGAGA AGACCGGCGA CCCGGGACGG CTGGTGGAAT GCGACCGCAC CTCGCAGATC
TTCAGCAACC CGAAGGAGAA GCGCACCGAG GACTACGTCT CCGGGCGGTT CGGCTGA
 
Protein sequence
MATRIDISGL TAYYGKFKAV ADVNLTIEPK TVTAFIGPSG CGKSTVLRTL NRMHEVLPGA 
RVEGKVLLDG EDLYGPGVDP VNVRRNVGMV FQRPNPFPTM SIYENVIAGL KLNGVRKKAL
LDERVEESLR GANLWDEVKD RLNRPGAGLS GGQQQRLCIA RAIAVEPQVL LMDEPCSALD
PISTLAIEDL IQKLRSSYTI VIVTHNMQQA SRVSETTAFF SLEKTGDPGR LVECDRTSQI
FSNPKEKRTE DYVSGRFG