Gene Franean1_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0322 
Symbol 
ID5668746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp386441 
End bp387490 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content75% 
IMG OID641239253 
Productalpha/beta hydrolase fold 
Protein accessionYP_001504694 
Protein GI158312186 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.529473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.20701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAGCGA TGGAGGATGC GACCCCCGAG TCCGCCACGG TTCTCGTCGA CGGGCCGTGG 
CGCCACCGTG ACGTATCGAC CAACGGGACC CGCCTGCACG TCGCCGAGGC CGGCGAGGGG
CCGCTGGTCC TCCTCCTCCA TGGCTTCCCG CAGTTCTGGT GGACGTGGCG CAGCCAGCTC
CGGGACCTCC CGCGGGCCGG CTACCGGGTG GTCGCCGCGG ACCTGCGCGG GTACGGCGCC
AGCGACAAGC CGCCCAGAGG CTACGACGCG TTCACCCTGG CCGACGACGT CGCCGGCCTG
GTACGGGCCC TCGGCGAGCG GGACGCGGTG ATCGTCGGGC ACGACTGGGG GGGCCTGCTC
GGCTGGACGA CCGCGGTCCG CCGCCCGCGG GTGGTGCGCG CGCTGGCGGT GATCGGCATG
CCCCATCCGC TGCGGATCCG GCGCCAGATC GCCGCGGACC CCCGCGGACA GGGCCTGGCC
AGCTGCCACC TGGCCGCCTA TCAGCTGCCG TGGCGGCCTG AGCGCCGCCT CGTCGCCGAC
GGGGCGGCGC ACGTCGGCGA GCTGCTGCGC TCCTGGGGCG GACCGGGCTA CCCGGCGCCG
GAGACCGAGG CCCGCTACCG CCTCGCGATG CGGATCCCCG GGGTCGCGCA CAGCTCCCTG
GAGTACCACC GCTGGGTCGT GCGCTCGCTG TTCCGCCCCG ACGGGGCACG TTTCGCCGAG
CTGCTCCGGA CGCCCGTGCG GGCGCCGACG CTGCAGCTGC ACGGACGGCT CGACCGCTGT
TTCCTGCCGT CCACGGCGGC CGGCTCGGAC CGCCACGTGG CTGCCAGCTA CTCCTGGCGG
CTGTACGACG GGCTGGGCCA CTTCCCGCAC GAGGAGGACC CCGACACCGT CACCCGCGAC
CTGATCACCT GGCTGGCCGA GACCGCGCCC GAGCAGGCCC CCACGGCCGA GGGAGCGGCC
GAACCGGCAC CGGACGCCGA ACCGGCGGCT GAACCGGACG CCGAACCGGA TGTCCGACCA
GAGCCTGGAC GGGAGTACGG ACGCCGGTGA
 
Protein sequence
MRAMEDATPE SATVLVDGPW RHRDVSTNGT RLHVAEAGEG PLVLLLHGFP QFWWTWRSQL 
RDLPRAGYRV VAADLRGYGA SDKPPRGYDA FTLADDVAGL VRALGERDAV IVGHDWGGLL
GWTTAVRRPR VVRALAVIGM PHPLRIRRQI AADPRGQGLA SCHLAAYQLP WRPERRLVAD
GAAHVGELLR SWGGPGYPAP ETEARYRLAM RIPGVAHSSL EYHRWVVRSL FRPDGARFAE
LLRTPVRAPT LQLHGRLDRC FLPSTAAGSD RHVAASYSWR LYDGLGHFPH EEDPDTVTRD
LITWLAETAP EQAPTAEGAA EPAPDAEPAA EPDAEPDVRP EPGREYGRR