Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0296 |
Symbol | |
ID | 5668720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 347677 |
End bp | 349551 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641239226 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_001504668 |
Protein GI | 158312160 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG2066] Glutaminase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.339618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCGG GCGGGAACGC ACGGCCAGCC AAGGACTCCC GTCTACGAGC ACCGGACGCC GGTCCGATGG AGCGGATGCT TGCGGACATC CATGAGGCTT TCCGCACCGA CCGGTCGGGG AAGGTCGCCA GCTTCATCCC CGAGCTCGCG ACCGCGGACC CGGCCCTGTT CGGCCTCGCC GTCACGACGA TGGACGGGCT GCGCTACCGG GCGGGCGACA GCGACGTCCC GTTCACGATC CAGTCGGTGT CGAAGCCGTT CGTTTACGCG CTGGCCCTGC GTGACCGCGG GACCGACGGT GTGCTGGCCA GGGTCGGGGT CGAGCCGACC GGCGACGCCT TCAACGCGAT CACGCTCGAG CCGGAGACCG GCCGTCCGCT GAACCCGATG GTGAATGCCG GGGCGCTGCT CACCTCCAGC CTGGTGGGCG GCGGTGACGC GGCCGAGCGT TTCGACCGTG TCCTGACGGG TCTGTCGGCG TTCGCGGGCA GGCAGCTGAC CGTGAATGAG CGGGTCTTCG CCTCCGAGCG GGACACCGGT GATCGAAACC GTGCGATCGG CTACCTGATG CGTGGCGCGG GGGCGCTGCG GGGGCCGGTG GACGAGATCT GTGAGGTCTA CTTCCGGCAG TGCGCCGTGG AGGTTACCGC GGCGGACCTC GCGGTGATGG CCGGCACCCT CGCCCGCGGC GGGGTGAACC CGCTGACCGG CGAGCGCGTC CTGAACGAGG AGCACGTCAA CCATGTGCTG ACCGTCATGG CGACCTGCGG CATGTACGAC CGGGCGGGAA CCTGGCTGTT CCGGGTGGGC CTGCCCGCGA AGAGCGGGGT CGCCGGAGGA GTGTGCGCGG TGCTGCCCGG GCAGCTCGGG ATCGGCGTCT TCAGCCCGCC GCTCGACGAG GTGGGCAACA GCGTCCGCGG CGTGCGCGCC TGCGAGCGGC TGGCCTCCCG GTTCGCACTG CATCTCCTTG CCCCGCAGGG AGAACCGCCG CACCCGGTGC GGGGCACGCA CCGTGGCGAC GCGCTGAGCT CGAAGCGGAT GCGAGGCGCG CGGGAACGGG CCGTCCTCGC CGTACGGGGT TCCGCGATCG TCATCCACGA GCTGCAGGGC GATCTGGTGT TCGCCAGCGC GGAGCGGGTT GTGCGCACCG TCCGCCAGCA CCTGGACGAC GTCCGCTGGG TGGTGCTCGA CCTGCGCCGG GTGGCCGCCG TCCGGGAGCC CGCCCTCGAG CTCCTGCGGG TGCTGCTCGA CGAGCTGGCC AGCCGGGACG TCAACGTCCT GTTCGCCGAC CCGCGTGGGC TTCCGGGCGT CGACCGCCTG ATGCGGGGGG ACTGGAGCAC GCAGCGCGTT CCCGATCTGG AGACCGCACT CGAATGGGCG GAGGAGGCGC TGCTGATGCG CGAGGACCTC GCGACCCTCC CGCCGACCGC GCACGTCCCG CTCGGCGCGC AGGAACTGCT CACCGATCTC GGCAAGGAGG GCACCCGGGT CATCGGCGCG ATGTGCGAAC GACGCACCTA CGAACGCGGC GCGACGGTCT TCGACGAGGG AGATCCGGCG GACGCGCTCT ACTTCGTCAC CAGGGGCCTG GCGAACGCGC AGGCGCCGAA CGCGGACGGG ACGCGCTGGT TCCGGCTCAG CTCGGTTCCA GCCGGCAGTG CGTTCGGTGA GCTGGCACTC GTCGATGGCG GCCGGCGTTC CACCCGGATC GTCGTCGCGG AGACCATGAC CTGCGAGGTG CTCTCGGTCG CGGCGTTCGA CACCCTGGTG CGGGAGCATC CGGACGTCTA CAACGCGCTG GTGCGCGCGA TCGCGCGCAG CCTCTCGGCA CAGCTGCGCC GAGCGACCCG GGAGATCCAG TCGCTCGAAG AGTGA
|
Protein sequence | MRAGGNARPA KDSRLRAPDA GPMERMLADI HEAFRTDRSG KVASFIPELA TADPALFGLA VTTMDGLRYR AGDSDVPFTI QSVSKPFVYA LALRDRGTDG VLARVGVEPT GDAFNAITLE PETGRPLNPM VNAGALLTSS LVGGGDAAER FDRVLTGLSA FAGRQLTVNE RVFASERDTG DRNRAIGYLM RGAGALRGPV DEICEVYFRQ CAVEVTAADL AVMAGTLARG GVNPLTGERV LNEEHVNHVL TVMATCGMYD RAGTWLFRVG LPAKSGVAGG VCAVLPGQLG IGVFSPPLDE VGNSVRGVRA CERLASRFAL HLLAPQGEPP HPVRGTHRGD ALSSKRMRGA RERAVLAVRG SAIVIHELQG DLVFASAERV VRTVRQHLDD VRWVVLDLRR VAAVREPALE LLRVLLDELA SRDVNVLFAD PRGLPGVDRL MRGDWSTQRV PDLETALEWA EEALLMREDL ATLPPTAHVP LGAQELLTDL GKEGTRVIGA MCERRTYERG ATVFDEGDPA DALYFVTRGL ANAQAPNADG TRWFRLSSVP AGSAFGELAL VDGGRRSTRI VVAETMTCEV LSVAAFDTLV REHPDVYNAL VRAIARSLSA QLRRATREIQ SLEE
|
| |