| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0256 |
|---|
| Symbol | |
|---|
| ID | 5668681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 309460 |
|---|
| End bp | 310581 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641239186 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001504629 |
|---|
| Protein GI | 158312121 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGG CACGAGGGCT GACCAAGCGT TACGGTCGTA CCGTTGCCGT CAACGACCTG
ACCTTCACGG TGCAGCCCGG CAAGGTGACC GGCTTCCTGG GCCCCAACGG CGCGGGTAAG
TCGACCACGA TGCGCATGAT TCTCGGGCTC GACCACCCGT CGGCCGGCAA GGTCCTGATC
GGCGGGCGCA GGTACCGGGA GCTCAAGGAG CCGCTGCGCG AGGTCGGCGC GCTGCTCGAG
GCGAAGTGGG TCCACCCCAA CCGCTCGGCG CGCGCGCACC TGCGCTGGAT GGCCGCTTCC
AACCGGCTGC CCGCCAAGCG GGTGGACGAG GTCCTGGAGA TCGTCGGTCT CACCGCGGTG
GCCGGGCGCC GGGCCGGAGG CTACTCCCTC GGCATGGCCC AGCGCCTCGG GATCGCGGTC
GCGCTGCTCG GTGACCCCGG GGTGCTGCTG TTCGACGAGC CGGTGAACGG CCTGGACCCG
GAGGGAATCC TCTGGATTCG CCAGTTCATG CATCGGCTCG CCGATGAGGG CCGCACGGTG
TTCGTGTCCA GCCATCTCCT CTCCGAGATG GCGCTGACCG CCCAGGAACT CATCGTCATC
GGCCGCGGGC GACTCATAGC GCAGACGAGC ACCAAGGAGT TCATCAACTC GGCGTCCGAC
TCCTCGGTGC GGGTGCGCGG CCCCGAGATG GAGCGGCTGC ACGGCGTCCT CACCGGCCAG
GGCCTGGCGG TCCAGGAGAC ACCCGCCGCC ACCGACACCC CGGCCGCCCT GGTGGTTCGC
GGCAGCTCCA CCGAGCAGGT GGGCGAGCTG GCCGGCGCCG TCGGGCTGGT CCTGCACGAG
CTCTCCGAGT CGCGTGGCTC GCTGGAGCAG GCGTTCATCC AGATGACTGG CGGCGACGTC
GAGTATCACG CGGGCGGTGT CGGCCCCACC GGGCCGCTCG TCGGCACCGG GCCGGCCGGC
GCACCCGGCG CACTCGGCGT TCCCGGCCCG CAGCCCGGCG CGGTGCCCGC TCCCACCTCT
CCGGGCGCGA CACCCGCCGG ACCATCGGGC CCCGGCGGCC CGTCGATACC GGCGCCTACC
AGCCCTGGTA CCGATGCCTG GACGGGGGTC AACAAGCCAT GA
|
|---|
| Protein sequence | MIEARGLTKR YGRTVAVNDL TFTVQPGKVT GFLGPNGAGK STTMRMILGL DHPSAGKVLI
GGRRYRELKE PLREVGALLE AKWVHPNRSA RAHLRWMAAS NRLPAKRVDE VLEIVGLTAV
AGRRAGGYSL GMAQRLGIAV ALLGDPGVLL FDEPVNGLDP EGILWIRQFM HRLADEGRTV
FVSSHLLSEM ALTAQELIVI GRGRLIAQTS TKEFINSASD SSVRVRGPEM ERLHGVLTGQ
GLAVQETPAA TDTPAALVVR GSSTEQVGEL AGAVGLVLHE LSESRGSLEQ AFIQMTGGDV
EYHAGGVGPT GPLVGTGPAG APGALGVPGP QPGAVPAPTS PGATPAGPSG PGGPSIPAPT
SPGTDAWTGV NKP
|
|---|
| |