Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0211 |
Symbol | |
ID | 5668636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 257313 |
End bp | 258596 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641239140 |
Product | adenylosuccinate synthetase |
Protein accession | YP_001504584 |
Protein GI | 158312076 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0104] Adenylosuccinate synthase |
TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.398163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCGCAC TAGTCCTCAT CGGCGCCCAG TGGGGCGACG AGGGAAAAGG AAAGGCGACC GACCTCCTGG GCGGCGCCGT CGACTACGTC GTCCGCTACC AGGGTGGCAA CAACGCCGGA CACACGGTGG TGATCGGTGC GGAGAGTTAC GCCCTGCACC TGATTCCGTC CGGTGTGCTC CGCACCGACT GCGTTCCGGT GATCGGTAAC GGCGTCGTGA TCGACCCCGG TGTGCTGCTC TCGGAGATGG ATGGCCTACA GGCCCGCGGA GTCGACGTCT CCCGTCTGCT CATCAGCGCG GACGCCCATC TGATCATGCC GCACCACCGC GCCCTGGACA GGGTCACCGA GCGGTACCTG GGCAAGGCCC GGATCGGCAC GACGGGCCGG GGCATCGGCC CTGCGTACGG GGACAAAGTC GCCCGCACCG GCATCCGGGT GCAGGACCTG CTCGACCCCG GCATCTTCCG GCAGAAGCTG GAGCTGGCGC TACGGGAGAA GAACCAGGTC CTGACCAAGG TCTACAACCG GCGGCGCATC GAGGTCGACG AGGTCGTCGA GGAGTACGCC GCCTACGCCG AGCGGCTGAC CCCGCACATC GCCGACACCG GCCTGCTCCT CGACACCGCC CTGCGCGAGG GCAAGGTCGT CCTCCTCGAG GGCTCCCAGG GCACCCTCCT GGACGTCGAC CACGGCACGT ATCCGTTTGT GACCTCCTCG AACCCGACCG CCGGCTACGC CGCGACCGGC GCCGGCATCG GCCCCACCCG CATCAACCGG GTGATCGGGA TCATCAAGGC GTACACGACC CGGGTCGGCG CCGGCCCGTT CCCGACCGAG CTCGACGACA AGGTCGGCGA GGAGCTGCGC CGCATCGGCG GAGAATTCGG GGTCACCACC GGCCGGGCCA GGCGCACCGG CTGGTTCGAC GCGGTCATCG CCCGCTACGC AGTCCGGGTG AACGGCCTCA CCGACCTTTT CCTCACCAAA CTCGACGTAC TTTCCGGCTT CGACACGGTG CCGGTCTGCG TGGGCTACGA GATCAACGGT CAGCGCACCG ATGAGATGCC GATGACGCAG ACGGAGTTCC ACCACGCGAA ACCGATCTAC GTCGAGCTGC CTGGGTGGCA CGAGGACATC TCGGGTGTCA CCCGGTTCGC CGATCTCCCC GAGGCCGCCC AGGCGTATGT GGCGACACTC GAGGAGATGG CGGGCGCCCC GGTGTCGGCG GTCGGGGTGG GCCCCGGCCG CGCCCAGACC CTGGTGATCA ACGAACTGAT CTGA
|
Protein sequence | MPALVLIGAQ WGDEGKGKAT DLLGGAVDYV VRYQGGNNAG HTVVIGAESY ALHLIPSGVL RTDCVPVIGN GVVIDPGVLL SEMDGLQARG VDVSRLLISA DAHLIMPHHR ALDRVTERYL GKARIGTTGR GIGPAYGDKV ARTGIRVQDL LDPGIFRQKL ELALREKNQV LTKVYNRRRI EVDEVVEEYA AYAERLTPHI ADTGLLLDTA LREGKVVLLE GSQGTLLDVD HGTYPFVTSS NPTAGYAATG AGIGPTRINR VIGIIKAYTT RVGAGPFPTE LDDKVGEELR RIGGEFGVTT GRARRTGWFD AVIARYAVRV NGLTDLFLTK LDVLSGFDTV PVCVGYEING QRTDEMPMTQ TEFHHAKPIY VELPGWHEDI SGVTRFADLP EAAQAYVATL EEMAGAPVSA VGVGPGRAQT LVINELI
|
| |