| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0196 |
|---|
| Symbol | |
|---|
| ID | 5668621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 241413 |
|---|
| End bp | 242174 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641239125 |
|---|
| Product | pantothenate kinase |
|---|
| Protein accession | YP_001504569 |
|---|
| Protein GI | 158312061 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
|---|
| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.699479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGA CGATCGACGT AGGCAACACG AACACCGTGC TGGGTGTTTT CGACGGCGAT
CAGCTCGCCA ACTCGTGGCG GGTCCGCACC GACCCGAGAG CGACCGCCGA CGAGCTGGGC
TGGCTCTACC GCGGCCTCCT CGGCGACCAC CCGATCGGCG GTGTCTCGGT GTGTTCCACC
GTGCCGGCCG CCCTCCGGGA GATCCGCCGG ATGGTCAGCC GGACGTTCCC GGCGATGCCG
ACCGTCGTCG TCGAGCCCGG CACCCGCACC GGGGTGCCGA TCCTGATCGA CAACCCGAAG
GAGGCCGGCG CCGACCGGAT CATGAACACA CTGGCCGCCC ACCACCTCTA CGGCGGCCCG
GCGATCGTGG TCGACTTCGG CACGGCCACG AACATCGACG TGGTGTCCGC GCGGGGCGAG
TTCCTCGGCG GGGCGTTCGC GCCGGGCATC GAGGTCGCGC TGGACGCGTT GGCCTCCCGT
GCCGCGCAGC TGCGCAACGT CGAGCTGACC ACCCCCCGTT CGGTGATCGG CAAGAGCACC
GTCGAGGCAC TGCAGTCCGG GATGATCTAC GGCGTCGTCG GCCAGGTGGA CGCGCTGGTC
CGCCGCATCC GGGCCGAGCT GGGCACACCG GCCACCACGA TCGCCACCGG CGGCCTGGCC
CCGCTGGTGA TCAAGGAGAG CGAGACCCTC GACAATCACG AGCCGCACCT GACCCTGATC
GGGCTGCGGC TTGTCTTCGA GAAGAACACC GAACCGCGCT GA
|
|---|
| Protein sequence | MLLTIDVGNT NTVLGVFDGD QLANSWRVRT DPRATADELG WLYRGLLGDH PIGGVSVCST
VPAALREIRR MVSRTFPAMP TVVVEPGTRT GVPILIDNPK EAGADRIMNT LAAHHLYGGP
AIVVDFGTAT NIDVVSARGE FLGGAFAPGI EVALDALASR AAQLRNVELT TPRSVIGKST
VEALQSGMIY GVVGQVDALV RRIRAELGTP ATTIATGGLA PLVIKESETL DNHEPHLTLI
GLRLVFEKNT EPR
|
|---|
| |