Gene Franean1_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0194 
Symbol 
ID5668619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp239718 
End bp240254 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content77% 
IMG OID641239123 
Producthypothetical protein 
Protein accessionYP_001504567 
Protein GI158312059 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT CACCGCGAGT GCTCTACCAC GTCGTGTGCG CGGCGCTGCC CGCGCTGGCC 
GCCGCGGACT TCGCCACCGA GGCCCGCCGG GACGGCTGGG ACGTGTGCGT CGTGACGACG
CCGCGGGCCG CCGCCTGGCT GGACCTGCCT GCCCTCGCCG CGGCCACGGG ACATCCCGTG
CGCACCGACT ACAAGTTTCC GGGCCAGCCC GACGTCCTCC CGCCGCCGGC CGCCTTCGTG
GTGGTCCCGG CGACCTTCAA CACGATCAAC AAGTGGGCGG CCGGCATCGC GGACACCCTC
GTGCTGGGGC TGCTCACCGA GGCGCTCGGC CTCGGTCTCC CGGTCGTCGC GGCGCCCTGC
CTGGCGGAGC CGCAGGCGGC CCATCCGGCC TTCGCGGCGT CGTGCCGCAC GCTGCGCGGC
GCCGGCGTGC GGCTGCTCGA CCGCTGGACG GCGCGCGATC CCGGCCTGGC CGCCGGCGGC
TGGGAGACGG CCGACACCCA CCGGGTGCTC GCCGAGCTCC GGTCCGCCGC GGGCTGA
 
Protein sequence
MTTSPRVLYH VVCAALPALA AADFATEARR DGWDVCVVTT PRAAAWLDLP ALAAATGHPV 
RTDYKFPGQP DVLPPPAAFV VVPATFNTIN KWAAGIADTL VLGLLTEALG LGLPVVAAPC
LAEPQAAHPA FAASCRTLRG AGVRLLDRWT ARDPGLAAGG WETADTHRVL AELRSAAG