| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0190 |
|---|
| Symbol | |
|---|
| ID | 5668615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 233346 |
|---|
| End bp | 235850 |
|---|
| Gene Length | 2505 bp |
|---|
| Protein Length | 834 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641239119 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001504563 |
|---|
| Protein GI | 158312055 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.362734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGA GGTTCACCGA CCGGGCACGT CGGGTCGTCG TCCTGGCCCA AGAAGAGGCC
AGGATGCTCA ACCACAACTA CATCGGGACC GAGCACATCC TGCTCGGCCT GATCCACGAG
GGCGAGGGCG TCGCCGCTAA GGCCCTCGAG TCGCTCGGGA TCTCGCTCGA GGGTGTGCGG
TCACAGGTCG AGGAGATCAT CGGGCAGGGT CAGCAGGCGC CGAGCGGGCA CATCCCGTTC
ACGCCCCGGG CCAAGAAGGT CCTCGAGCTG TCCCTGCGTG AGGCTCTCCA GCTCGGCCAC
AACTACATCG GCACCGAGCA CATTCTGCTC GGCCTGATCC GCGAGGGCGA GGGCGTCGCC
GCCCAGGTGC TGGTCAAGCT CGGCGCGGAC CTCAACCGGG TCCGTCAGCA GGTCATCCAG
CTCCTGTCCG GCTACCAGGG CAAGGGTGAC CCGGCGACCG CCGGCGCCCC GGCCGAGGGA
ACGCCGTCGA CCTCGCTGGT CCTCGACCAG TTCGGCCGCA ACCTCACCGC GGCCGCTCGT
GAGTCCAAGC TCGACCCGGT CATCGGGCGC GAGAAGGAGA TCGAGCGCGT CATGCAGGTG
CTGTCGCGCC GGACGAAGAA CAACCCCGTC CTGATCGGCG AGCCCGGCGT CGGCAAGACC
GCCGTCGTCG AGGGGCTCGC GCAGGCGATC GTCAAGGGCG AGGTCCCCGA GACCCTGAAG
GACAAGCAGC TCTACACCCT CGACCTCGGC GCGCTCGTCG CCGGGTCCCG CTACCGCGGT
GACTTCGAGG AGCGGCTGAA GAAGGTCCTC AAGGAGATCC GCACCCGCGG CGACATCATC
CTGTTCATCG ACGAGCTCCA CACGCTCGTC GGTGCGGGTG CCGCCGAGGG CGCGATCGAC
GCCGCCTCCA TCCTCAAGCC CATGCTGGCG CGCGGGGAGC TGCAGACGAT CGGCGCGACC
ACGCTGGACG AGTACCGCAA GCACCTGGAG AAGGACGCCG CTCTCGAGCG GCGGTTCCAG
CCGATCCAGG TCGCGGAGCC GTCGGTGGCG CACACCATCG AGATCCTCAA GGGCCTGCGC
GACCGGTACG AGGCGCACCA CCGCGTCTCG ATCACCGACG CCGCCCTGGT GGCCGCGGCC
TCCCTGGCCG ACCGCTACAT CTCCGACCGG TTCCTGCCGG ACAAGGCCAT CGATCTGATC
GACGAGGCCG GCTCCCGGAT GCGCATCCGC CGGATGACCG CTCCGCCGGA CCTGCGGGAG
TTCGACGAGC GCATCGCGAA CGTCCGCCGG GACAAGGAGT CCGCGATCGA CGCGCAGGAC
TTCGAGAAGG CCGCGTCGCT GCGCGACAAG GAGAAGACCC TGCTGGCCGA GAAGGCCAAG
CGGGAGAAGG AGTGGAAGGC CGGCGACATG GACGTCGTCG CCGAGGTCGG CGACGAGGAG
ATCGCGGAGG TCCTCGCGAT CTGGACCGGC ATCCCGGTCT TCAAGCTCAC CGAGGAGGAG
ACCGCGCGTC TGCTCCGCAT GGAGGACGAG CTCCACCGCC GGGTCATCGG CCAGGAGCAG
GCCATCAAGG CCGTCTCCCA GGCGATCCGG CGCACCCGCG CCGGGCTGAA GGACCCGAAG
CGCCCCGGCG GCTCGTTCAT CTTCGCCGGC CCGTCCGGTG TCGGTAAGAC GGAGCTGTCG
AAGACGCTGG CGGAGTTCCT CTTCGGCGAC GAGGACTCGC TCATCCAGCT CGACATGTCC
GAGTACATGG AGAAGCACAC CGTCTCGCGG CTGGTGGGCT CCCCGCCCGG CTACGTCGGG
TACGAGGAGG GCGGCCAGCT CACCGAGCGG GTGCGGCGCA AGCCGTTCTC CGTGGTCCTC
TTCGACGAGG TCGAGAAGGC CCACCCGGAC GTCTTCAACA CGCTCCTGCA GATCCTGGAG
GACGGTCGCC TGACCGACTC CCAGGGCCGG CTGGTCGACT TCAAGAACAC CGTTCTGATC
ATGACGTCGA ACCTGGGCAC CCGGGACATC TCCAAGGGCC CCGGCATCGG GTTCGCCACC
GGCCAGGGCG CGGTCGACTA CGAGCGGATG AAGGCGAAGG TCCAGGACGA GCTCAAGCAG
CACTTCCGGC CTGAGTTCCT CAACCGGATC GACGACATCA TCGTCTTCCA CCAGCTCTCC
GAGAACGAGA TCATCCAGAT CGTGGATCTC ATGCTCGCCC GGGTCGACAG CCAGCTGAAG
AACAAGGACA TGGCGCTGGA GCTCACGCCG GCCGCCAAGG CCCTGCTCGC CAAGCGTGGC
TACGACCCGG TGCTCGGCGC CCGGCCACTG CGCCGGACGA TCCAGCGGGA GATCGAGGAC
ATCCTGTCCG AGAAGATCCT GTACGGGACG CTGCGTCCCG GCGAGATCGT GGTCGGCGAC
GTCGAGGGTG AGGGCGAGGA GGCGAAGTTC GTCTTCCGCG GCGAGCCGAA GCCGAACTCG
GTGCCGGACT CCCCGCCGAT CGACCTCGCC AAGTCCAGCG AGTGA
|
|---|
| Protein sequence | MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKALE SLGISLEGVR
SQVEEIIGQG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA
AQVLVKLGAD LNRVRQQVIQ LLSGYQGKGD PATAGAPAEG TPSTSLVLDQ FGRNLTAAAR
ESKLDPVIGR EKEIERVMQV LSRRTKNNPV LIGEPGVGKT AVVEGLAQAI VKGEVPETLK
DKQLYTLDLG ALVAGSRYRG DFEERLKKVL KEIRTRGDII LFIDELHTLV GAGAAEGAID
AASILKPMLA RGELQTIGAT TLDEYRKHLE KDAALERRFQ PIQVAEPSVA HTIEILKGLR
DRYEAHHRVS ITDAALVAAA SLADRYISDR FLPDKAIDLI DEAGSRMRIR RMTAPPDLRE
FDERIANVRR DKESAIDAQD FEKAASLRDK EKTLLAEKAK REKEWKAGDM DVVAEVGDEE
IAEVLAIWTG IPVFKLTEEE TARLLRMEDE LHRRVIGQEQ AIKAVSQAIR RTRAGLKDPK
RPGGSFIFAG PSGVGKTELS KTLAEFLFGD EDSLIQLDMS EYMEKHTVSR LVGSPPGYVG
YEEGGQLTER VRRKPFSVVL FDEVEKAHPD VFNTLLQILE DGRLTDSQGR LVDFKNTVLI
MTSNLGTRDI SKGPGIGFAT GQGAVDYERM KAKVQDELKQ HFRPEFLNRI DDIIVFHQLS
ENEIIQIVDL MLARVDSQLK NKDMALELTP AAKALLAKRG YDPVLGARPL RRTIQREIED
ILSEKILYGT LRPGEIVVGD VEGEGEEAKF VFRGEPKPNS VPDSPPIDLA KSSE
|
|---|
| |