| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0169 |
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| Symbol | |
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| ID | 5668594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 202782 |
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| End bp | 203795 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641239098 |
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| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
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| Protein accession | YP_001504542 |
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| Protein GI | 158312034 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
[COG1539] Dihydroneopterin aldolase |
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| TIGRFAM ID | [TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain
[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0060964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.143037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTC CGGCCGGCGG TGTCCCGACC GGCGGTGTAG CGGCAGACGC GGCCCGGCTC
GACCGGATCG CCCTGACCGG CCTGCGCGTG CACGGCCGGC ACGGGGTGCT GCCCGCGGAA
CGGGAGCTCG GGCAGTTCTT CGTCGTCGAC GCCACGCTCT GGCTGGACAC CGGCCCGGCG
GCGGCCACCG ACGACCTCAC CCTCACCGTG CACTACGGCG AGCTGGCGCA GGCCCTCGCC
GACATCGTCG CCGGCGAGCC CGTCGAGCTG ATCGAGACCC TGGCGCACCG GCTGGTCCGG
GCCTGCCTGG CGGCCGACCC GCGGGTGGCC GCCGCCGAGG TGACCGTGCA CAAGCCCGCC
GCCCCGATCA CCGTCGCGTT CACGGACATC GCCGTGACGG TGGCCCGCTC CCGGGACGCC
GCCGTGACCA CGGGCCCTTC CCGGGAGGTG GCCGCGACGT GCTCCCGGGA CGTCGCCGCG
GCCGCCGGGC CGTCCGCCGC GGGCGCGAGT GCGAGTGCGG GGCACGCGGT GGTCGCCATC
GGTTCCAACA TCGGCGACCG GCTCGCCCAC CTGCGGGGCG CCGTCCGCGA CCTGGACGCC
AGGCTGGGCG TGCTCGCCGT CTCCGCCGTG TACGAGACCG AGCCGGTCGG CGGCCCCGAG
CAGGACGACT ACCTCAACGC GATCGTCCTG GTCGGCGCCG CGCCGCCGCG CGACCTGCTC
GCCGCGGCCC GCGCCGCCGA GCGGACCGCC GCGCGCGAGC GCACCATCCG CTGGGGCCCC
CGCACGCTGG ACGTCGACAT CATCGCCTGC GGCGACACCC GCAGCGACGA TCCGGAGATC
CTGCTGCCGC ACCCGCGGGC GCACGAACGC CTGTTCGTCT GCGTCCCCTG GCTGGACGTC
GAACCGGACG CGATGCTGCC CGGGCACGGC CGGGTGGCGG ACCTGGTCGC GCGCCTCTCG
GTGGTGCCGG GAGCGGCCGC GCTCCGGCGC ACCCCCCACG GGCTCGGTCG GTGA
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| Protein sequence | MTAPAGGVPT GGVAADAARL DRIALTGLRV HGRHGVLPAE RELGQFFVVD ATLWLDTGPA
AATDDLTLTV HYGELAQALA DIVAGEPVEL IETLAHRLVR ACLAADPRVA AAEVTVHKPA
APITVAFTDI AVTVARSRDA AVTTGPSREV AATCSRDVAA AAGPSAAGAS ASAGHAVVAI
GSNIGDRLAH LRGAVRDLDA RLGVLAVSAV YETEPVGGPE QDDYLNAIVL VGAAPPRDLL
AAARAAERTA ARERTIRWGP RTLDVDIIAC GDTRSDDPEI LLPHPRAHER LFVCVPWLDV
EPDAMLPGHG RVADLVARLS VVPGAAALRR TPHGLGR
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