| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0162 |
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| Symbol | |
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| ID | 5668587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 192539 |
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| End bp | 193717 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641239091 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001504535 |
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| Protein GI | 158312027 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.555099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0738774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCACCGG AGCCACCATC GCCGGTCTTT GACGTGGTCG TGCTGGGCGC CGGGCCGGCC
GGCACGAGCG CGGCGCGCGC GGCCGCCGAG GCAGGCGCCC GGGTATGCGT GCTCGAGCGG
ATGGCCGTGC CGCGCTACAA GACCTGCGGC GGCGGCCTGG TCGGCCTGTC CGTCGACCAC
GCCGGGATCG ATCTCGCTCC ACTCGTCCGG TCGCGGGTGG ACGTGCTCAC GATGACCCTC
GACGGCCGGT ACCCGGTCAC CCGGTGCCGC AAGGACGGCC GTCCGCTGCT GTCGATGGTG
ATGCGCTCGG AGCTGGACGC GGCGCTGCTC GACTCGGCGA AGGCGGCCGG CGCGGAGGTC
CGCACCGGTG TGCACGTGAC CGGGCTGCGC GAGGAGGGCA CGGCCGAGCC CGGGCGTGGC
GAGGTGGCCG TCCAGGTGCG GTCCGGGCCG GCGGTGCGGG CGCGGGTGGT GGTCGGCGCC
GACGGCACCT CGGGCCGGGC CGGCACGCAC GTCGGCGTCA CCTGCGACCA GGTGGACGTC
GGCCTCGAGG GCGAGTTCGA GGTGCCCGCC CCGGTGGCCG GCGAGTGGTC CGGCCGGATG
CTGCTCGACT GGGGCCCGGT GCCCGGATCG TACGGGTGGG TCTTCCCGAA GGGCGACGTG
CTCACGGTCG GGGTCATCGG CGCCCGGGAG CACGGGCCCG CACTGCGCCG CTACTACGAC
GCGCTCGTCG AGCGGCTCGG CCTCACCGCC GCCCCCCGGC TGCACGACTC CGGCCACCTG
ACGCGGGTGC GGGCCGCCGG CTCACCGCTG CGGCGCGGCC GGGTGCTCCT CGCCGGCGAC
GCGGCGGGCC TGCTCGACCC GTGGACCAGG GAAGGGATCT CCTTCGCGCT GCGCTCCGGC
CGGCTCGCGG GCATCAGCGC CGCCGCCGGC GCGGCCGGTG ACCCGACGGC CCTCGACCGG
TACCCGGCCC GGATCGAGGG CGTGTTCGGG CCGGAGATCG CCGCGGGCAG GTCGGTGCTG
GCGGTGTTCA CCCGCCGTCC GGCGCTCATG CACACGATGA TGACCCGGGT ACCGGGCACG
TTCGGGCTGT TCGGCCGGAT CATCGAGGGC CGCTCCACGA TCGCCCGCCA GCTGCGCCGG
CCCGGCGTGG CCGCCGCCAT CGCCGCGCTG GGCCGCTGA
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| Protein sequence | MPPEPPSPVF DVVVLGAGPA GTSAARAAAE AGARVCVLER MAVPRYKTCG GGLVGLSVDH
AGIDLAPLVR SRVDVLTMTL DGRYPVTRCR KDGRPLLSMV MRSELDAALL DSAKAAGAEV
RTGVHVTGLR EEGTAEPGRG EVAVQVRSGP AVRARVVVGA DGTSGRAGTH VGVTCDQVDV
GLEGEFEVPA PVAGEWSGRM LLDWGPVPGS YGWVFPKGDV LTVGVIGARE HGPALRRYYD
ALVERLGLTA APRLHDSGHL TRVRAAGSPL RRGRVLLAGD AAGLLDPWTR EGISFALRSG
RLAGISAAAG AAGDPTALDR YPARIEGVFG PEIAAGRSVL AVFTRRPALM HTMMTRVPGT
FGLFGRIIEG RSTIARQLRR PGVAAAIAAL GR
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