Gene Franean1_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0149 
Symbol 
ID5668574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp178340 
End bp178690 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content73% 
IMG OID641239078 
Productrhodanese domain-containing protein 
Protein accessionYP_001504522 
Protein GI158312014 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0127705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCCC AGCAGATACC GACCGTGAAC GTGACGGAGC TTCCCGTCCA CCTGCCCGCC 
GAGGGTGGCC CGCTGCTCGT CGACGTACGC GAGCCCGACG AGTGGGCCGC CGGTCACATC
GACGGCGCGG TCCACATCCC GATGGGCGAC TTCCTGGCCC GCATCAGCGA GGTCCCCCGG
GAGCGGGAGA TCGTCGTGGT GTGCCGCTCC GGCAGCCGGT CGGCCGCCGT CACCGCGCAC
CTGGCCCGTG AGGGCTGGCA GGCCCGCAAC CTCGTGGACG GGATGATCGG CTGGCAGGCC
GCCGGCCGCC CCATGATCAG CGAGACCCCG CTCGCCCCCA CCGTGCTCTG A
 
Protein sequence
MSPQQIPTVN VTELPVHLPA EGGPLLVDVR EPDEWAAGHI DGAVHIPMGD FLARISEVPR 
EREIVVVCRS GSRSAAVTAH LAREGWQARN LVDGMIGWQA AGRPMISETP LAPTVL