Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0138 |
Symbol | |
ID | 5668563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 166492 |
End bp | 167895 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641239066 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_001504511 |
Protein GI | 158312003 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.568402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00197643 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGCCTCA GGCTTCACTT CGCCGTCCGC TCGGATGTCG GGCACGTCCG AGAAGGGAAC GAGGACTCCG CCTACGCGGG AGCCCGCCTG CTCGCGGTGG CCGACGGTAT GGGCGGCCAC GCCGCCGGGG AGGTCGCGAG CTCGACCGTC ATCTCCCGGC TGGCCGAACT CGACGAGCAC CTCGACGCGA CAGACCTGCT CGAGGAGCTG TCCGACGCCG TCCGGGACGC CAACCGTCGC CTGCGCGACA TGGCGATGGA GAACAGCTCC CTGGACGGGA TGGGCACCAC GGTGACCGCG ATGCTGTCCT CCGGGGAGCA TCTCGGCCTG CTGCACGTGG GCGACTCCCG CGCGTACCTG TTGCGCGACG GCGTGCTGAC GCAGATCACC CATGACCACA CCCTCGTCCA GGACCTGGTC GACCAGGGTC GGATCACCCC GGAGCAGGCG AACACCCATC CGCAGCGGTC GCTGCTGATG CGGGCGCTCG ACGGCCGCGA GGTCGAGCCG GACGTCTCGA TGCGCCAGGC CGTCGACGGG GACCGCTACC TCCTGTGCAC CGACGGCCTG TCCGGGGTGG TCAGCGAGGA GACGATCCTG GAGGCGCTGC TGCTTCCGGC GCCGCAGGAT GTGGTGGACC GCCTGGTCGA GCTCGCCCTC AAGGGCGGCG GCCCGGACAA CATCACGGTG GTGGTCGCGG ACGTCATCGA CGACGACCTC GACGACGACG CCCCGCTCGT GGCGGGCGCG GCCGCGGAGA AGCGCGTGGT CCCCGGGGCG GCGGCGGCCC GCACCGGACC CAACCCGCGC AACACCGACT CCGAGTCGGC GGCGGCGAAG GCGGCCCGCA TCGGTCGGCC GGGCTTTCAC CGCCGGGGCT CCGGCGACCG CCACGACGAT CCCGACGACG ACCCCGAACG AGGCACGGCC CACGGCGGCC GGCGCCGCCT GTTCATGTCG ACGGTCGTGC TCGTCCTGGT GGTCGCCGGC GCGGCAGCCG GCTGGACGTA CGTGCGCGGC CAGTACTACG TGGGCGTCGA CGACGACCAC GTGGCGGTCT TCCAGGGGCT GAAGGGGAGC ATCGCGGGCA TCTCGCTCTC GACGGTGCGT TCCCGCCACC AGCTCCTGTC CGAGGTCAAC GAGCCCTTCC AGGACACCGT GCGCCAGGGC ATCGAGGCCG ACGACCTCTC CGAGGCCCAG CGCATCGCGG CCGACCTGCC CACGGCGTCC CCGGCCGCCT CGACCACCGA CACCGCGCCG ACCACGTCCC CCACCCGGGC GCCGGACGCG AAGACGTCCA GGTCGGATCC GCTCCCGACC GTCGACCCCA CGTGCCTGGG CGCGGTGACC GGCGCCGCGC CGCCACCGGG CTGCCCCGGG GTGGGCGTGA CGCCGTCCCC GTGA
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Protein sequence | MSLRLHFAVR SDVGHVREGN EDSAYAGARL LAVADGMGGH AAGEVASSTV ISRLAELDEH LDATDLLEEL SDAVRDANRR LRDMAMENSS LDGMGTTVTA MLSSGEHLGL LHVGDSRAYL LRDGVLTQIT HDHTLVQDLV DQGRITPEQA NTHPQRSLLM RALDGREVEP DVSMRQAVDG DRYLLCTDGL SGVVSEETIL EALLLPAPQD VVDRLVELAL KGGGPDNITV VVADVIDDDL DDDAPLVAGA AAEKRVVPGA AAARTGPNPR NTDSESAAAK AARIGRPGFH RRGSGDRHDD PDDDPERGTA HGGRRRLFMS TVVLVLVVAG AAAGWTYVRG QYYVGVDDDH VAVFQGLKGS IAGISLSTVR SRHQLLSEVN EPFQDTVRQG IEADDLSEAQ RIAADLPTAS PAASTTDTAP TTSPTRAPDA KTSRSDPLPT VDPTCLGAVT GAAPPPGCPG VGVTPSP
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