Gene Franean1_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0133 
Symbol 
ID5668558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp159068 
End bp159718 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content74% 
IMG OID641239061 
Productpara-aminobenzoate synthase component II 
Protein accessionYP_001504506 
Protein GI158311998 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.524343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.12907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCC TGGTCGTCGA CAACTACGAC TCGTTCGTGT TCAACCTGGT GCAGTACCTG 
GGCCAGCTCG ACACCGAGTG TGTGGTGCGC CGCAACGACG AGGTCGACCC GGGCGACCTC
GACGAGCTGG GGGCCGACGG CGTCCTGCTC TCGCCGGGGC CGGGCACCCC CGAGGCGGCC
GGGGTCAGCA TCGCGATGGT GCACGCCTGC GCGGCGCGCC GGCTGCCGCT GTTCGGCGTG
TGCCTGGGCC ACCAGGCGCT CGGGGTCGCC CACGGGGCCA CGGTCGACCG GGCGCCCGAG
CTGCTGCACG GCAAGACCTC GGTGGTCCAC CACGAGGGCG TCGGCGTGCT CGCGGACCTG
CCCTCGCCGT TCACCGCCAC CCGCTACCAC TCGCTGGCGG TCGAGGAGAG CACGCTGCCG
GCGGAGATCG AGGTGACCGC GCGCACCGAC AGCGGGGTGG TCATGGCGAT GCGGCACCGC
GAGCTGCCGC TGGAGGGTGT CCAGTTCCAC CCCGAGTCGG TGCTGACCCA GGGCGGGCAC
CTGATGCTCG CCCGCTGGCT GGAGATCTGC GGCGACGGCG GCGCGGCCAT GCGGCTGGCG
CCCGCCCTTG CGGCCGAGGT CGAGACCCTG CGCCTGGCCG CCTTCGCCTG A
 
Protein sequence
MRILVVDNYD SFVFNLVQYL GQLDTECVVR RNDEVDPGDL DELGADGVLL SPGPGTPEAA 
GVSIAMVHAC AARRLPLFGV CLGHQALGVA HGATVDRAPE LLHGKTSVVH HEGVGVLADL
PSPFTATRYH SLAVEESTLP AEIEVTARTD SGVVMAMRHR ELPLEGVQFH PESVLTQGGH
LMLARWLEIC GDGGAAMRLA PALAAEVETL RLAAFA