| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0121 |
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| Symbol | |
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| ID | 5668546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 145039 |
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| End bp | 146910 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641239049 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001504494 |
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| Protein GI | 158311986 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.412208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGTCC GTCACGCTCC GTTCCCGGTG TCCCGGCGCA CCTGCATGCC TGGCGGCATG
ATGGGGCACA TGGGAGGCGA CGAGACCGAG CGGTCGGGCG CGGACATCGA GCGTCGGGAC
GACTGCGACG TTCTGGTGAT CGGCAGCGGG TTCGGGGGCA GCGTGACCGC GCTCCGCCTG
GCCGAGAAGG GCTACCGCGT CACGGTCGTC GAGGCCGGCC GCCGGTTCAC CCCGGCGACA
CTGCCGAAGA CGAGCTGGGA CATCCGCAGG TACCTGTGGC TTCCGCGGCT CGGGTGCCAC
GGGATCCAGA AGATCACCCT GCTCGGGCGG GTGCTGGTGC TCTCCGGAGC AGCGGTCGGC
GGTGGATCGG TCGTCTACGC GAACACGCTG TACAGGCCCC TGGACGGTTT CTACGACGAT
CCCCAGTGGG CGGACATCGC CGACTGGCGT GCCGAGCTCG GGCCGTTCTA CGGCCAGGCC
GAGCGCATGC TCGGCTCCAC CCGGAACCCG TCGATGACCA TGGCGGACGA GGTCTTCCGG
GACGTCGCAC GGGATATGGG TGTCGGGGAC ACCTTCCGCC TGGCCGACGT CGGCGTGTTC
TTCGGCCGCG ACGGCCAGCG CGAGCCGGGG GTGACGGTTC CCGATCCCTA CTTCGGCGGC
GCCGGCCCCG CCCGGACGGG CTGCGTCGAG TGCGGCGAGT GCATGACGGG ATGCCGGCGC
GGCGCGAAGA ACACCCTGGA CCGCAACTAC CTCCACCTGG CCGAAGGGCT GGGCGCCCGC
ATCGTGGCGG ACACGACCGT GCGCTCGGTG CGCCCCGACG GGCGCGGTGG CTACGAGGTC
GAGACGGTCC GCACCGGCAG CCGGCGGCGG GACGCGCGGC GCTGGACGGC CCGCCAGGTC
GTGTTCGCCG CGGGCGCCCT GGGAACCCAG CGCCTCCTGC TCGGCATGCG CGAACAGGGG
CACCTGCCCG GCATCTCCGA CCGGGTCGGC CACCTGACCA GGACGAACTC CGAGGCGATC
CTGGGCGCGA CCCGGCTGCG GCCGGATGGG CGGATCACCC GGGGGGTGGC CATAACGTCG
TCCTTCTACC CGAACGATCA CACGCACGTG GAACCTGTCC GGTACGGCCG GGGCAGCAAC
CTCATGGCGT TCCTGTCGAG CGCCATGACC GACGGCGGAG GCTCCCTGCC ACGCTGGGCG
AAGCACCTGC TGCTGCTGGC CCGCCGCCCG TACCTCACGC TGCTCGCCCT GCCGTGGCGG
TGGTCGGAGC GAACCATGAT CGCTCTCGTC ATGCAGTCCC GGGACAACTC GCTCACCGTC
AGCCGGCGCC GCGGGCCGTT CGGGACGTCC TGGCTGACGA GCCACGCTGG CCACGGGGAG
TCCAACCCGA CCTGGATACC GGAGGGCAAC CAGGCGGCGC GGCTGGTGGC GGAGCGGCTG
GGCGGGCATC CGGGAGGCGC GATCACCGAG CTGGCCGACA TCCCGCTGAC GGCGCACATC
CTCGGCGGGG CGGTCCTGGC CGCTGATCCC GCCCGGGGCG TGATCGACCC GTATCACCGG
GTTTTCGGCC ATCCCGGCCT GCACGTTGTG GACGGCTCGG CGGTGCCGGC GAACCTCGGG
GTGAACCCCT CGCTGACGAT CACGGCGATG GCGGAGCGGG CGATGGCCTT CTGGCCGAAC
CGGGGTGACA CCGACCCCCG CCCGCCGGTG GGCGCGGCGT ACCGGCGGAT CGCGCCGGTG
GCACCGCGGA ACCCGGCGGT GCCCGCGGAT GCACCGGGAC ATTATGAAAT AAGTGCCCTG
ACCAGCACGA ATACTGATCT TCCCCGGGAT GCTGTAGCTG GCGGTGGCCG GGAGACTCCT
CACAATATGT GA
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| Protein sequence | MVVRHAPFPV SRRTCMPGGM MGHMGGDETE RSGADIERRD DCDVLVIGSG FGGSVTALRL
AEKGYRVTVV EAGRRFTPAT LPKTSWDIRR YLWLPRLGCH GIQKITLLGR VLVLSGAAVG
GGSVVYANTL YRPLDGFYDD PQWADIADWR AELGPFYGQA ERMLGSTRNP SMTMADEVFR
DVARDMGVGD TFRLADVGVF FGRDGQREPG VTVPDPYFGG AGPARTGCVE CGECMTGCRR
GAKNTLDRNY LHLAEGLGAR IVADTTVRSV RPDGRGGYEV ETVRTGSRRR DARRWTARQV
VFAAGALGTQ RLLLGMREQG HLPGISDRVG HLTRTNSEAI LGATRLRPDG RITRGVAITS
SFYPNDHTHV EPVRYGRGSN LMAFLSSAMT DGGGSLPRWA KHLLLLARRP YLTLLALPWR
WSERTMIALV MQSRDNSLTV SRRRGPFGTS WLTSHAGHGE SNPTWIPEGN QAARLVAERL
GGHPGGAITE LADIPLTAHI LGGAVLAADP ARGVIDPYHR VFGHPGLHVV DGSAVPANLG
VNPSLTITAM AERAMAFWPN RGDTDPRPPV GAAYRRIAPV APRNPAVPAD APGHYEISAL
TSTNTDLPRD AVAGGGRETP HNM
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