| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0099 |
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| Symbol | |
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| ID | 5668524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 117226 |
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| End bp | 118992 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641239027 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001504472 |
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| Protein GI | 158311964 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCACA GCCGTCGGCG CGACCGGCTC TTCCGCCGCG CGGCGGTCGG CGCCGCGGTG
CTGACGGGCG CCTGCGTGGT TCTCGCCCAG GTGCTCCCCG ACAGCCTGGC GCTGTCCGCC
GTCCGACTGA CGGTGATCGG GTTCCTGCTG CTCGGCGGGA CGACCTGCGT GGTCGCCGGG
CTGCGTCGCC ATGGCGCCGA GCGGTGGTGG CGGCTTCTCA TGGCGGTAAT GGTTCTCGCC
GTGGCGGTGG CGTCGGCCGC GGTGTTCCGG GACACGGCGG CGGGGCGATC TCCCGTCCCC
CAGCTGACCC CGGCCTCGCT GGTGTATCTG ATTCCGCTCG CGATGGGTGT CGCCGGCGTG
CTGCTCTACC CGACCGACCC CGTCGAGCAC GACGACGCCG AGGACGGCGG GCCGCTGCAC
GCCTACCGCT GGTACGCGAT CACGGTCCTG GACGGCATGA TCGTGGTCGG CTCGGTGGCG
CTGCTGGTCT GGGCCACCGT GCTGGAGCGC ACGGTCGGGC ACGGCGAACC ACTCGGCCCC
GGCCCGCTCT ACTCGATCAT CCTCGCCGCG GTCTCGCTCG TGGTCTTCGT CGTGCTGATC
CTGGTGGCCG TGTTCCGCGA GCCGCGCGAC AGCCGCGGCC ACGCGCTCCT GCTCGCGGGC
ATGTGCGCCG CCTCGATCTC CGCCATGTGG GAGCTCGCGG TGCTCATCCA CGGCCTGGAC
GACGTCCCGC GGCTGACCGA CCTGCCCATT GGCATCGGTG CGCTGCTCAT CGGCCTGGCC
GCCATCTCCA CCGATCCCGA TACGGGTGCC ACTACCGGTG CCGACGCCGC TGCCGACGTC
GATGTCGATG CCGATGCCGA TGCCGTGGGA GTGGGACTGG CCGCCGTTCC CAGCCTGGGT
CGGCGGGCCG CCTCGGCCAG GCTCCGCCGG TGGCACGCGA TCCTGCCGTA CCTCCCGCTG
ACCGCGGCCG GGGCGGCGAC GGTGCTCCAG ATCGCCGGAG ACGGCATCGG GCACTGGGAG
GAGATCTGGG CGCTGCTCGC CCTGCTGCTA CTCGCGCTGG TGCGCCAGAT GATGACGATG
TCGGACAACA TCCGCCTGCT CGGCCAGGTG GAGGAGAAAC AGCGGCAGCT GCGGCACCAG
GCGTTCCACG ACCCGCTGAC CGGGCTGGCG AACCGCAGCC TGTTCATCGA CCGGCTCGAG
CGGGCGCTGC ACCGCCAGCC GGGCCCCGCC GAGCGCTTCG CCGTCCTGTT CTGCGACCTC
GACGACTTCA AGCGGGTCAA CGACGTCCTC GGCCACGCGG CGGGCGACGA CCTGCTGCGG
ATCACCGGCG CACGGCTCGC CGGCTGCGTC CGCGCGGCGG ACACCGTGGC CCGCCTCGGC
GGTGACGAGT TCGCGATCCT GCTCGTCTCG GCCAACATCG ACGATCCCGA GGCAGTCGGA
TGTCGGCTGG CGGCCGCGGT CCGGGCGCCG GTGCGGCTGG CGAGCCACAC CTTCACCGTC
GCGGCCAGCG TGGGCCTGGT GACCGTCGAC CCGGAGACCG GGACGGGTGC CCCGCACCAA
GGCGCGGACC CGGACCCGGA CCCGGACACG GACACGGAGC CGCGCGCGGA CGTTCCGGAC
ACCGCCGAGC AGCTGCTGCA CCGCGCCGAC CTGGCGATGT ACGCGGCCAA GGCCAGGCGC
AACGGGGAGC CGGCCGTCTA CACCCCTGAG CTGGTGGGCC CAGGGCGGGC GCGGGCACGG
CCCGCCCGGA ACGTCCCGCT GCCCTGA
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| Protein sequence | MGHSRRRDRL FRRAAVGAAV LTGACVVLAQ VLPDSLALSA VRLTVIGFLL LGGTTCVVAG
LRRHGAERWW RLLMAVMVLA VAVASAAVFR DTAAGRSPVP QLTPASLVYL IPLAMGVAGV
LLYPTDPVEH DDAEDGGPLH AYRWYAITVL DGMIVVGSVA LLVWATVLER TVGHGEPLGP
GPLYSIILAA VSLVVFVVLI LVAVFREPRD SRGHALLLAG MCAASISAMW ELAVLIHGLD
DVPRLTDLPI GIGALLIGLA AISTDPDTGA TTGADAAADV DVDADADAVG VGLAAVPSLG
RRAASARLRR WHAILPYLPL TAAGAATVLQ IAGDGIGHWE EIWALLALLL LALVRQMMTM
SDNIRLLGQV EEKQRQLRHQ AFHDPLTGLA NRSLFIDRLE RALHRQPGPA ERFAVLFCDL
DDFKRVNDVL GHAAGDDLLR ITGARLAGCV RAADTVARLG GDEFAILLVS ANIDDPEAVG
CRLAAAVRAP VRLASHTFTV AASVGLVTVD PETGTGAPHQ GADPDPDPDT DTEPRADVPD
TAEQLLHRAD LAMYAAKARR NGEPAVYTPE LVGPGRARAR PARNVPLP
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