Gene Franean1_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0091 
Symbol 
ID5668516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp107696 
End bp108688 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content75% 
IMG OID641239019 
Productalcohol dehydrogenase 
Protein accessionYP_001504464 
Protein GI158311956 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAG CGGCGTTCGC GCGGCACGGT GGCCCGGAGG TTCTCGAGCT GATGGATCTG 
GCCACGCCGG TGGCCGGGCC CGGCCAGGTA CGGGTCCGGC TCCGGTTCGC CGGAGTCCAG
CCGATCGACT GCGCCGTCCG CGCGGGCTGG GCACCGCCCG GGGTGGCACC CCGGCTCCCG
ACGATTCCCG GCAACGAGTT CGCCGGAGTC GTCGACCAGG TCGGCGACAG GGTCGATGGA
GTCGGCGGGG CCGATGGGGC CGATGGAGTC GGCGGGATCG ACAGCGTCGG CGGCGTCGAC
GGCGGGGATC ACGGCGTCGT GGTGGGCGCC GAGGTGCTCG GCTTCGGACA GCTGGGTGCG
TATGCCGAGT ACCTGGTGGT ACCGGCCGAC CAGGTGACCG CCAAGCCGGC CGGCATGCCC
TGGGAGGTCG CGGGTGGGTT CAGCGGCGGG GCACAGACCG CCCACATCGC GCTGCGGGAG
CTGGGCGTCG GCAAGGGCGA CACCGTCCTG ATCCACGCCG CCGCCGGCGG GGTCGGGACG
GTCGCCGTCC AACTGGCCGT ACGCGCCGGC TCGACCGTCA TCGGCACCGC CGGCGCGGCC
AACCACGACT ATCTCCGCTC ACTGGGCGCA ATCCCGGTCG CCTACGGCGA CGGCCTGGTC
GAACGCGTCC AGGCGATCGC GCCCGGCGGC GTGGACGCCG CGCTGGACGG AGCCGGCGGC
GACGCGCTGA CCGCGTCGCT GGCGCTGGTC GCCGACCGGA GCCGGATCCT CACCCTCGTC
GAGCACGGCC GGGCGGGGGA GCTCGGAATC CGGGTCACGC CCAACCTCCG CTCGGCGGCC
CGGCTCGCCG AGCTGGCCGA CCTCCAGGCG CACGGAGCCC TGCACATCAA CGTCCGCCGG
GTCGTCCCGC TCGCGGACGC CGCCGAGGCG CACCGGGAGC TGGAGACGAG ACACGGCCGC
GGCAAGATCG TCCTCGCCGT CAGCAGCGGC TGA
 
Protein sequence
MKAAAFARHG GPEVLELMDL ATPVAGPGQV RVRLRFAGVQ PIDCAVRAGW APPGVAPRLP 
TIPGNEFAGV VDQVGDRVDG VGGADGADGV GGIDSVGGVD GGDHGVVVGA EVLGFGQLGA
YAEYLVVPAD QVTAKPAGMP WEVAGGFSGG AQTAHIALRE LGVGKGDTVL IHAAAGGVGT
VAVQLAVRAG STVIGTAGAA NHDYLRSLGA IPVAYGDGLV ERVQAIAPGG VDAALDGAGG
DALTASLALV ADRSRILTLV EHGRAGELGI RVTPNLRSAA RLAELADLQA HGALHINVRR
VVPLADAAEA HRELETRHGR GKIVLAVSSG