| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0089 |
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| Symbol | |
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| ID | 5668514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 106070 |
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| End bp | 106681 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641239017 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001504462 |
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| Protein GI | 158311954 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGATG ACGGACACGA TGAGTTCCGG GCGTATTTCA CCGCCCGGCT GCCGGCCCTG
CTGCGGCTGG CGTACCTGCT GACCGGCGAC GCGGCCGAGG CGGAGGACCT GGCGCAGACG
GCGCTGGCAC GTACCTTCGT CGCCTGGCGG AAGGTCCGTG TGTGCGACTC CCCTGACGCC
TACGTGCGGC GAATTCTCGT CAACGCTCAT CGGCGACGGT TCCGCGGCCG CCGGGTGGTC
GAGACGCTGA TGCCCACGGT GCCCGACAGG CTGGTTGGCG GGTCCGCCGG CGAGCTGGCG
GCGGTGGAGG ACCGGGCGGG ACTCGCGGCG GCGCTGGCCG CCCTGCCCAC TCGGCAGCGG
GCCGTCGTGG TGCTGCGCTA CTGCGAGGAC CTGTCCGAGG CCCGTGTCGC GGAGATCCTC
GGCTGCTCAG TCGGGACTGT GAAGACCCAC GCGTCACGGG GCCTGGCCCG GTTGCGGGCC
GATCCGTCGC TGGGGACGGC GATGGGACCG CGGTCCGACG GCGTGCGGCA GCCGTCGAGA
TCCGGCGACG GCGCCGTGCC GCCCCAGCTC GGCGCATCGG AACTGGACGG GACGAGGGGA
GGTGCGGCAT GA
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| Protein sequence | MDDDGHDEFR AYFTARLPAL LRLAYLLTGD AAEAEDLAQT ALARTFVAWR KVRVCDSPDA
YVRRILVNAH RRRFRGRRVV ETLMPTVPDR LVGGSAGELA AVEDRAGLAA ALAALPTRQR
AVVVLRYCED LSEARVAEIL GCSVGTVKTH ASRGLARLRA DPSLGTAMGP RSDGVRQPSR
SGDGAVPPQL GASELDGTRG GAA
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