Gene Franean1_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0087 
Symbol 
ID5668512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp103928 
End bp104269 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID641239015 
Producthypothetical protein 
Protein accessionYP_001504460 
Protein GI158311952 
COG category[S] Function unknown 
COG ID[COG3462] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCA CCTGCCGCTT CGGAGGTAAC TGCGTGATGA TGTACTGGAG TGATCGCGAT 
ATCAGTGGTT GGGGCTGGTT CGCCATGTCC ATGGGCATGC TGCTGTTCTG GGCTGTGCTC
ATCACCGTGG CGGTGCTGCT CGTCCGGGCC CTGATCCGCT CCGACGAACG GAGACGTCCT
GCGACGCGTT CGCCCAGCGA GCCCGGAGCT GCTCACGGAC CAGCCGTACC GTCACCCGAG
GAAGTTCTGG CTGACCGTTT CGCCCGAGGC GAGATCGACG AACAGGAGTA CCGCGTCCGC
TTGGCGACCC TCCGAGACAC CGCCCGTTTC GTCAAACACT GA
 
Protein sequence
MAVTCRFGGN CVMMYWSDRD ISGWGWFAMS MGMLLFWAVL ITVAVLLVRA LIRSDERRRP 
ATRSPSEPGA AHGPAVPSPE EVLADRFARG EIDEQEYRVR LATLRDTARF VKH