Gene Franean1_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0083 
Symbol 
ID5668508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp99828 
End bp100331 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content72% 
IMG OID641239011 
Producthypothetical protein 
Protein accessionYP_001504456 
Protein GI158311948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGAA CCACACGTCC GCTGACGGCG GTGGCCGCCG GCCTGAGCCT GGTGGTCATG 
GCCATGGCCG GTTGCGGCTC CGGCGGCGGC ACGGCGCCGG GCGGGACGGC GTCCGGCGGC
GGTACCACTG GGACGCCGAC GGTACAGACG TACGCACAGT GCATGCGTGA CCACGACATC
GACATGGCTG ATCCGGACCC GTCCACGGGA GTTCCGCAGT TCGGGGAGGG TGTTGATCCG
GACGATCCGG CCGTGAAGCA GGCGCTGGCC GCCTGCCAGG ATCTGCTTCC CGCGGGCAGC
CGGGGAGAAC CGAGCGACGC GGATCTCGCC GTCTATGTGG CCTTCGCGCA GTGCATGCGC
GACAACGGGC TGCCGGGCTT CCCCGACCCC CAGCCCGGCT CGGCTGGCGG CCTGTTCGCC
GGCGCGGACG TTGACCGTGG CGATCCGGCG TTCCAACAGG CGGCCCGGCA GTGCCAGGGC
ATCCTCGACG AGGCCGGCGC GTGA
 
Protein sequence
MIRTTRPLTA VAAGLSLVVM AMAGCGSGGG TAPGGTASGG GTTGTPTVQT YAQCMRDHDI 
DMADPDPSTG VPQFGEGVDP DDPAVKQALA ACQDLLPAGS RGEPSDADLA VYVAFAQCMR
DNGLPGFPDP QPGSAGGLFA GADVDRGDPA FQQAARQCQG ILDEAGA