| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0078 |
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| Symbol | |
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| ID | 5668503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 95113 |
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| End bp | 95979 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641239006 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001504451 |
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| Protein GI | 158311943 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAGA CGGAGCGACG TGGCGGCGTC CTCGTAAGCG GCGCGGCCGG CGGGATCGGC
GCGGCGACCG TGCGGCTGCT GGCCGATCGG GGCTACCTGG TGTTCGCGGC GGTGCGCGCG
GAGAACCACA CCAGCCGCGT CCTGGCCGAC CTATCCGGCG TGCAGGTGGT CACGATGGAC
GTCGCCGACC CGGAGAGCGT CGCCACAGCG GCCGAAGAGG TTAACGGCGC GGTGCCGAAC
GGCGGCCTGC GCGCGGTGGT CAACAACGCC GGCGTGATCG TGCAGGGGCC GCTGGAGCTG
GTGCCACCGG ACGAGCTGCG CCGCCAGTTC GAGGTCAACA CCTTCGGGCC GGCCTACGTC
ACCCAGGCGT TTCTGCCGAT GCTGCGGGCC GGCCACGGCC GGATCATCAA TGTCACCGCG
CCCACCGCTC GCGTCCCGAT GCCGTTCATG GCACCGATCT CAGCGAGCAA AGCAGCCCTC
GACGCGCTTT CCACCGCTCT GAGGCTGGAA CTGGCCGCGT GGAAGGTGCC AGTAGTGCTC
GTCGAGCCGG GTGCCACCGA GACCCAGATC TTCGACAAGG CCGACACCGC AGCGCGGGAG
GCGTTGGGGG CGGCCACACC GGCGCAGGTG GCGCTCTACC GCGACCACCT CACCGCGATG
GAGCAGGCGA GAAAGCGGTT GCGGACCCGG CCGGTCGAGC CGGTTGCCCG CGCGATCGCG
ACCGCCGTGA CCGCCCGCCG TCCGCGGCGG CGTTACTCCA TCGCCGACGC CCGCGCCATC
GGTGTCCTCG CCCACCTGCC CGCCCGGCTA CGCGAGCGCC TGGTCATGAG CACCCTCGGG
CTACGCGGGG TGGGAACCGA ACGATGA
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| Protein sequence | MTETERRGGV LVSGAAGGIG AATVRLLADR GYLVFAAVRA ENHTSRVLAD LSGVQVVTMD
VADPESVATA AEEVNGAVPN GGLRAVVNNA GVIVQGPLEL VPPDELRRQF EVNTFGPAYV
TQAFLPMLRA GHGRIINVTA PTARVPMPFM APISASKAAL DALSTALRLE LAAWKVPVVL
VEPGATETQI FDKADTAARE ALGAATPAQV ALYRDHLTAM EQARKRLRTR PVEPVARAIA
TAVTARRPRR RYSIADARAI GVLAHLPARL RERLVMSTLG LRGVGTER
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