| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0055 |
|---|
| Symbol | |
|---|
| ID | 5668481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 68240 |
|---|
| End bp | 69427 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641238984 |
|---|
| Product | lanthionine synthetase C family protein |
|---|
| Protein accession | YP_001504429 |
|---|
| Protein GI | 158311921 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG GCACCGCCGC TGCGGTGGAG ACGTTCTCCG CCGACGACGC GGTCAGGCAA
TCCCTCGCCC GGGGCCCGGT CGGGACAGCA CTGCTGCAGA TCGAGCGTGC CCGGACCGGT
TCGGGCGGCT GGGACACCGC GCACGCCCAC ATCCGGCGGG CTGTAGCCGG GCCGGTCGAT
GCGGCCGAGC ACGCCGGCCT GTACTACGGG GCGCCCGCCC TCGCCTTCCT CCTTCAGGCA
GCCGCCGATG GGAATCCCCG CTACCGCAGA GCCCGCGACA CGCTGGACAC CCACGTGCTG
CGCCTGACCC GCCGCCGGCT GACGCTCGCC GCCAGCCGAG CCACACGCGG CGAGCCCACC
GCCTTCGCCG AATACGACCT CTTCTACGGC CTGACCGGCA TCGGCACGCT CCTGCTCCGC
AGCCACCCCG ACAGCGAGAT CCTCGCCGAC GTCCTGCGGT ACACCGTCAG CCTGACCCGG
CCGCGCCGCG AGAACGGCGT CAACCTGCCG GGCTGGTGGG TCACACATGA CCCGGACGAC
ACGCTGCCGA CCCCCGGCGG GCACGCGAAC CTCGGCATGG CACACGGCGC GGCCGGTCTG
CTCGCCCTCC TCGCTCTCGC CACCGCCGAA GGGCACCTGG TCGACGGCCA AGGCGAAGCG
ATCGCCACCC TGACCAGCTG GTTCGACCAG TGGCGCCAAG ACGGTGCTGA CGCCCCCTGG
TGGCCGCAGT GGATCACCCG CGAGGACCTG CGCACCGGAC GCCCCACCCA AACCAGCCCC
GGCCGTGTCT CCTGGTGCTA CGGCACGATC GGCATCGCCC GCGCCCAGCA GCTCGCCGCC
CTCGCCACCC ACGATCAGCA ACGGGCACAG GACGCCGAGA GCACCCTCGC CGCCGCCCTG
ACCGACACCC AGCTCGACCG GATCAGCGAT CTCGGCCTGT GCCACGGCCT GGCAGGGATC
TACCAAACCG CCTATCGAGC CGCCCGCGAC GCGCGAAGCT CCGCCATCGG CCGGCGGCTT
CCCGCGATCG CCGCCCGGCT CGCGCAGCAC GCTACCGCCT CCTCCGTGAC CGGCGAGCAG
GACAGCGGGC TGCTGACCGG CACCGCGGGG ATTGCCCTGG CGCTGGAATC CACCCGACAT
GTCGGACCAC CACGCACGGG ATGGGACACA TGCCTGCTCA TAGCCTGA
|
|---|
| Protein sequence | MTPGTAAAVE TFSADDAVRQ SLARGPVGTA LLQIERARTG SGGWDTAHAH IRRAVAGPVD
AAEHAGLYYG APALAFLLQA AADGNPRYRR ARDTLDTHVL RLTRRRLTLA ASRATRGEPT
AFAEYDLFYG LTGIGTLLLR SHPDSEILAD VLRYTVSLTR PRRENGVNLP GWWVTHDPDD
TLPTPGGHAN LGMAHGAAGL LALLALATAE GHLVDGQGEA IATLTSWFDQ WRQDGADAPW
WPQWITREDL RTGRPTQTSP GRVSWCYGTI GIARAQQLAA LATHDQQRAQ DAESTLAAAL
TDTQLDRISD LGLCHGLAGI YQTAYRAARD ARSSAIGRRL PAIAARLAQH ATASSVTGEQ
DSGLLTGTAG IALALESTRH VGPPRTGWDT CLLIA
|
|---|
| |