Gene Franean1_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0047 
Symbol 
ID5668473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp61583 
End bp61909 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content67% 
IMG OID641238976 
Producthypothetical protein 
Protein accessionYP_001504421 
Protein GI158311913 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAGC TGGAACCCGG AGCGGTCAAC ATCTCCTACG GCGTCTTCCC TCACTGGCGC 
GGCCGCGGCA TCACGCGCCG GGCCATCTCC CTCGTCTACC ACTGGCTGCG CACGCAACCT
GCCTGCACCA CGGTGGTCAT CCGCGTCGCC CCGGACAACA TCCACTCGCT GCGGATCCCT
GAAGCGCTCG GCTTCCAACA CGTCGAACCC AGCACCAGCC CCCAAGGCGA AGAACTGATC
CGCTTCGACA AGGCCATTCA GCGTCATACC AGCGGCCAGC CGGCCCAGGA CGCGCGGCCA
GACGATGCCG CATCTCACCG CCTGTGA
 
Protein sequence
MPELEPGAVN ISYGVFPHWR GRGITRRAIS LVYHWLRTQP ACTTVVIRVA PDNIHSLRIP 
EALGFQHVEP STSPQGEELI RFDKAIQRHT SGQPAQDARP DDAASHRL