Gene Franean1_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0041 
Symbol 
ID5668467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp48701 
End bp49600 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content69% 
IMG OID641238970 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001504415 
Protein GI158311907 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGT CCGAGATGGA GATCAACGAA GATCTGGTCC GTGACTTGCT GCGGGAGCAG 
CATCCGGACC TGGCCGAGCT GCCCATCCGC GAGGTGGTGG GCGGCTGGGG AAACCAGATG
TGGCGCCTCG GGGACGACCT GGCCGTCCGG ATGCAGCGGA TGGACAAAAG CCCCGATCTA
CAACTCAAGG AACGCCGCTG GCTGCCGCAG CTGGCCTCAC GTCTGCCGCT TCCGATCCCG
ACTCCGGTGC GGAGCGGGAC ACCGTCCGAG CACTTCCCGA AGATCTGGAC GGTCATGACC
TGGGTGGAAG GCACGCCCCT GGACCATGGT TCGATCACCC GCGGCGACCA CGCGGCCGAC
ATGCTGGCGG CCTTTCTCGC CGCGCTGCAT GTGGAGGCGC CCGCCGAGGC GCCGGACGCC
GTGGACGTCG GCGCTCACCC CAAGCAGTGC ACAGGCGGGT TCGAGCACTT CCTGCGGTCC
GTGGACCTCG GCGGCTTCAC CGAGGACGAC ATCCGGGCTG TGTGGGACGA CGCGGTGGCG
GCCTCCGAGT GGCAGGGCCC ACGGGTGTGG GTGCACGGTG ACCTGCATCC CGCGAACGTC
GTCATCGCGG AGGGCACGCT GGCGGGCATC GTCGACTTCG GCGCAGTCTT CGCCGGCGAT
CCGGCGTGGG ATCTTGCGGC CGCCTGGCTG CTGCTCCCCG CGGGAGGCGC CTCGCGGTTC
TTCAACAGCT ACGCGCAGGC GGACGAGGCG ACGGTCCGAC GGGCGCGCGG GCTGGCCGCG
ATGAAGAGTC TGTTCTTGAT GCTGATGGGC CAGAACGGGG ACCGTGGCCT GCCCGGCGGC
AAGCCGCATT GGGGGCCCGC AGGCCGGTCG GCACTTGATC GTGTCCTGAA GGGCCTTTGA
 
Protein sequence
MIESEMEINE DLVRDLLREQ HPDLAELPIR EVVGGWGNQM WRLGDDLAVR MQRMDKSPDL 
QLKERRWLPQ LASRLPLPIP TPVRSGTPSE HFPKIWTVMT WVEGTPLDHG SITRGDHAAD
MLAAFLAALH VEAPAEAPDA VDVGAHPKQC TGGFEHFLRS VDLGGFTEDD IRAVWDDAVA
ASEWQGPRVW VHGDLHPANV VIAEGTLAGI VDFGAVFAGD PAWDLAAAWL LLPAGGASRF
FNSYAQADEA TVRRARGLAA MKSLFLMLMG QNGDRGLPGG KPHWGPAGRS ALDRVLKGL