| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0038 |
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| Symbol | |
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| ID | 5668464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 45693 |
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| End bp | 46814 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641238967 |
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| Product | integrase family protein |
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| Protein accession | YP_001504412 |
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| Protein GI | 158311904 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.967515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGATC GGGAGTCGGT GGCGGGCGCG GCGGGGCTGT ACCTGGTGGC TGGGGTGCCG
CTGTTGCGGG CGGATGAGCA GGTGTTCGCG GCGATGCTGG AGGGCTGGGG GAGCCAGCAG
ACGGCCCGCA ATCTGGCGGT GGGCACGGTC GAGGGGCGGG TCCGCGCGGT GCGGGCGTTC
ACCCGACACG CCGAGGCGTT TCCCTGGGCC TGGACGGCGG CGATGGTCGA CGAGTGGTGT
ACCGATCTTC GGGCGGTGAG GAACCTGCGT CGGTCGACGC TGCGGAATTA CCAGGAGGCG
GTCCGGCTGT TCTGCGTCTA CGTCACCGAT CCCGCCTACG GTTGGCCGGT CCGGTGTGAG
CAGGAGTTCG GCGCGCATCC GGTGCAGATC TGCCACGAGT GGAACACCAC GGTGCACGCC
CAGCAGTCCG AGAGCGACCC CGGCAAGCGG GCGTTCACGG TCGATGAGCT GCAGGCGTTC
TTCGACTACG CCGACGAGCA GGTCAGCCGG ATCCGGGCGG CTGGGCGCAA GGGCTGGCTG
CCGGCGTTCC GCGACGCGGT GCTGTTCAAG GTCGCCTACG CCTACGGGCT GCGTCGCAGG
GAGGTGCGGA TGCTCGACCT CGCCGACTTC GGCCGCAACC CGCACGGCCC CGAGTTCGGG
GACTACGGCG TCTGCCAGGT CCGGTTCGGC AAGGCCTCGA AGGGCTCGCC ACCGAAACGG
CGCGGCGTGC TGACCGTCTG GACGTGGACC CCGGAGATCC TCGCGGAGTG GGTGGAGGAG
TTCCGGCCGC TGCTCGCCCC GCAGGACTGC CCGGCGCTCT GGCCGTCAGA ACGGGCCCCG
CGGGTCGCGC TCACGCAGAT CAACGCCCGG TTCTCCACCT ACCGCGACGC GCTCGGCTTG
GACCCGGCGC TCGACGTCCA CTCGCTGCGC CGTTCCTACG TGACCCATCT GATCGAGGAC
GGCTACGACG CGCTGTTCGT CCAGCAGCAG GTCGGTCACG AGCACGCCTC GACGACCGCG
ATCTACATCT GCGTGTCCTC GGACTTCCGG ACCCGCACCC TGCGCCGCGC GCTCGACCAG
ACCCTGGCGG CGGCCCTGAC GCCGACGGAG AAGGCGCGAT GA
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| Protein sequence | MVDRESVAGA AGLYLVAGVP LLRADEQVFA AMLEGWGSQQ TARNLAVGTV EGRVRAVRAF
TRHAEAFPWA WTAAMVDEWC TDLRAVRNLR RSTLRNYQEA VRLFCVYVTD PAYGWPVRCE
QEFGAHPVQI CHEWNTTVHA QQSESDPGKR AFTVDELQAF FDYADEQVSR IRAAGRKGWL
PAFRDAVLFK VAYAYGLRRR EVRMLDLADF GRNPHGPEFG DYGVCQVRFG KASKGSPPKR
RGVLTVWTWT PEILAEWVEE FRPLLAPQDC PALWPSERAP RVALTQINAR FSTYRDALGL
DPALDVHSLR RSYVTHLIED GYDALFVQQQ VGHEHASTTA IYICVSSDFR TRTLRRALDQ
TLAAALTPTE KAR
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