| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0036 |
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| Symbol | |
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| ID | 5668462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 43699 |
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| End bp | 44568 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641238965 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001504410 |
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| Protein GI | 158311902 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCA CACCAGGCCC CACCGTGCGA CGCCGGTGCC TGGGCGCGGA GCTGCGCCGC
CTGCGGGAAG CCAAGGAACT GACCGTCGAC CAGGCCGGGG AACACATCCA CCGCAGCGGG
CCGACGATCA GCCGGATGGA GACCGGCCAG TTCCGGTTCG TCCTGCGTAA CGTCTCGGAC
CTGCTCGATC TCTACGGCGT CACCGACGAC GAGCAGCGCC AAGCCCTGCT GGCGCTGGTG
AAGGAGAACC GCAGACCCGC CTGGTGGCAC TCCTACGGCG ATCTCGTGCC CCGCTGGTTC
CAGGTCTACA TCGGCCTGGA AGCCGAAGCC TCCACGATCA CGACCTTCGA GAGCCTGCTC
GTCCCCGGCC TGCTCCAGAC CGAGGACTAC GCACGCGCGG TCATCCGCGC CGCCTCACCC
GAGCTACCCG CCCACGAAGT CGACCGGGCC GTCGAAGTCC GGATGAACCG GCAGAAGATC
CTCACCGGAG ACCAGCCCGT GCAACTCTGG GCGATCCTCG ACGAAGCCGT GATCCGCCGC
CACGTCGGAA ACCCCACCGT CATGGCCCGC CAGCTGGACC GGCTCATCGA AGCGGCCGAG
CAACCCGCCG TGACGATCCA GGTCGTGCCG TTCACCGCGG GCGCCCACGC CGGCATGATC
GCAAGCTTCA CGATCCTGGG CTTCCCCGAC ACTGGCGGAG CCTCCGAGAC GGTCTACATC
GAAGCTCCCA CGGGCAGCCT CTACCTGGAG AAACAAGCCG AGGTCCGACG CTACGAAGCC
TGGATGAACC AGCTCCGCAG CTCCGCCCTC GCACCCACCC CCAACACCCT CTCGATCATC
AAAGCGGCAC GTGAGGACCT ACAACGATGA
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| Protein sequence | MPSTPGPTVR RRCLGAELRR LREAKELTVD QAGEHIHRSG PTISRMETGQ FRFVLRNVSD
LLDLYGVTDD EQRQALLALV KENRRPAWWH SYGDLVPRWF QVYIGLEAEA STITTFESLL
VPGLLQTEDY ARAVIRAASP ELPAHEVDRA VEVRMNRQKI LTGDQPVQLW AILDEAVIRR
HVGNPTVMAR QLDRLIEAAE QPAVTIQVVP FTAGAHAGMI ASFTILGFPD TGGASETVYI
EAPTGSLYLE KQAEVRRYEA WMNQLRSSAL APTPNTLSII KAAREDLQR
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