Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0028 |
Symbol | |
ID | 5668454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 36044 |
End bp | 36967 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641238957 |
Product | hypothetical protein |
Protein accession | YP_001504402 |
Protein GI | 158311894 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAGGT GTCAGATCAG TGTCAGATCA CCGTCAGACG CCCGGGTATT CACTCGGACC CGAAAAGCCG CCCCGCCCAC CAGTCACATG CTCTGTGCTA TGTGGGCCGA CATTCTGTTG CGGAGGAACC GAGTGCCTCA GCCCCCTCGC CACCCGCCCG GACCCGAGCC ACATCCGGGT CATTCCACTC GTCTTCTGGT CCACGGACCG GTGCCCTCCG GCAGGCCGTG CAATGCTCCC GCGGCCCGTT CCATAGCCAC CTCCAACAAC ACCGACGCTC TGGCGCTCGG TGCCACCGGC ACGGGAATCG TGACGGCGTC ACCGACCGGC CCCACCACCG ACAGATCACA CTCGTGCGCA CGCGGCGTAC GGCCATCCCA CGGTCGCCAC ACGCTGCGGG GAAGGAGACG AGGCACTCAT CGTCGATCAA CCACGGCCAC CGCCTCGGAA AGGAATCTCA CCGATCCGAG TACCGTCTCG AGGCCGATCC CGGCCCACCC GAAAGCTGCC CACGACCTGT CACCCGATAT TTTCCAGGCC GGGTTCCGCT CATCATCGCC CCCGTGTGTG GCATCAGTGG CGTCTCTGTG CGCCGGGTTT CCGCTAACCC CTGCGGAAGG GCCACCTGCG GCGCCGTCGA CGTCGACCGG GCAGCCGGAG TGCATGGACG CGACTGCACC CGCAGTGCCG GCTAGGCCGA AAGTCTCGCC GCGCTCCGCC TCGGATTCGC CTCGATTCTC ACCGCAGCCG CGGTCCTCCG GCGACCGGCG ATCCTCGCCT ACTGACTGCA CGGCGAGCCC GTCGATCCGC CCGGCGCTGC CCCCGCCGCA CGTCACCGTG GATGAGGATG TCCGCGTTCT CTGCGGCACC AGCGGCCGGC CCAGCCAGAG CGAGAGTCCC CTGGCCTGGG CAAACACGAT CTGA
|
Protein sequence | MIRCQISVRS PSDARVFTRT RKAAPPTSHM LCAMWADILL RRNRVPQPPR HPPGPEPHPG HSTRLLVHGP VPSGRPCNAP AARSIATSNN TDALALGATG TGIVTASPTG PTTDRSHSCA RGVRPSHGRH TLRGRRRGTH RRSTTATASE RNLTDPSTVS RPIPAHPKAA HDLSPDIFQA GFRSSSPPCV ASVASLCAGF PLTPAEGPPA APSTSTGQPE CMDATAPAVP ARPKVSPRSA SDSPRFSPQP RSSGDRRSSP TDCTASPSIR PALPPPHVTV DEDVRVLCGT SGRPSQSESP LAWANTI
|
| |