Gene Franean1_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0019 
Symbol 
ID5668446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp25136 
End bp25678 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content72% 
IMG OID641238948 
ProductPEBP family protein 
Protein accessionYP_001504394 
Protein GI158311886 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC TGGACCGCAA CACCGCACCG GATCCGCTCG ACCTGCTGCC CCCGCTGCCG 
TCGTTCTCGC TGAGCAGCGA CGACCTGACC GACGGCAGCC CGCTTGGCCT GGACCAGGTG
TTCAGCGGCG CCGGCGGCGC GGATCTGTCG CCGCACCTGT CCTGGACGGG TTTCCCCGCG
CAGACCGAGA GCTTCGCCGT CACCTGCTTC GACCCGGATG CCCCGACCGG GAGCGGGTTC
TGGCACTGGG TGCTCGTCGA CGTGCCGGCC AGCGTGACGG AGCTGGCGCG GGGCGCCGGA
AGTGGTGACC TCTCCGGGTT GCCGGCCGGG GCATACCACG TCCGTAACGA CTGGGGCACG
GCGAACTACG GCGGCGCGGC GCCCCCCGAG GGAGACCGGC CGCACCGGTA CGTCTTCGTC
GTCCACGCCG TGGACGTCCC GAAGCTGGAG ATCGACGCGA CCGTGGCGCC CGCGGTCGTC
GGGTTCAACC TGACCTTCCA CACCCTGGCG CGGGCCGTGC TGCGGGCGAC CTACCAGCGC
TGA
 
Protein sequence
MSLLDRNTAP DPLDLLPPLP SFSLSSDDLT DGSPLGLDQV FSGAGGADLS PHLSWTGFPA 
QTESFAVTCF DPDAPTGSGF WHWVLVDVPA SVTELARGAG SGDLSGLPAG AYHVRNDWGT
ANYGGAAPPE GDRPHRYVFV VHAVDVPKLE IDATVAPAVV GFNLTFHTLA RAVLRATYQR