Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0017 |
Symbol | |
ID | 5668444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 23241 |
End bp | 24332 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641238946 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001504392 |
Protein GI | 158311884 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.447324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACGT TCGCGTCGAA CACCCTGGCC CTGGGGCCGG ACTTCATCAG TGCCGACAGT CTGGCGAAGG CCGGCCTGGT GGTCGTCCTT CTGATCGTCT TCGCCGAGTC GGGGTTGCTG GTCGGGTTCT TCCTGCCGGG TGACTCGCTG TTGTTCACCC TCGGTCTGCT GATCTCCCAG GACGAGGTGT CCACGCCGCT GTGGCTCGCG TGTGCCCTGA TCGGTGTGGC CGCGGTCGCG GGTGACCAGG TGGGCTACCT GTTCGGGCGG AAGGCGGGTC CGGCGCTGTT CCGGCGTCCG GACTCGCGGC TGTTCAGGCA GGAGTATGTG GATCAGGCGC ACGAGTTCTT CGAGAAGCAT GGTGGCCGCT CGATCGTGCT GGCGCGTTTC GTGCCGATCG TGCGTACCTT CACCCCGGTG ATCGCCGGGG TGAGTCGGAT GAACTACCGG ACGTTCGTGG TCTACAACGT GATCGGTGGC CTGCTGTGGG GCTGCGGGGT CACCGTTCTC GGCTCGCTGC TCGGGAAGAT CGATTTCATT CGCCAGAACC TCGAGGCGAT GCTGATCCTC ATTGTGTTGA TCTCGGTGGT CCCGATCCTG ATCGAGTACC TGCGCGCCCG CCGGACGAAG GCGACGACAG GGGACGCCGC CGGGTCCCCC GACGCCACCA ACGCCGCGGG TACCGGGCCC GCCGGGCCCG CCGCCGGCCA TGGTCCGGCC TGGGTGGACG GCCCGGTCCG GGAGCACGAC CGGGCCCCGG GCGCGGGGTT CGCGGGCGGC TACGAGAGCA CGGGCGGCTA CCAGCCCGCT GGCGGGTATC AGGGCGGGTA CCAGCCTGTG GACGTGTACC AGAGCGCGGA CGGGTACCGC AACGCGGACG GGTGGCAGCC GGAGAGCCGC TACGACGACG GACGTTACGA CCAGCCCCGT GCGGGCACGG CGGGTGCGGC CGGGCACGGC GGGCACGGCT ACGACACCGA GGGATTCCAG GATGCTCGGC CGCGGGAGGG CGAGGCCCCG ATCCAGGAGG AGCGTGGCCC GGCCGGGCGC CGCGGCGGTG GCGGGCGGCA CTCCGCTCCT CGGCACCGCT GA
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Protein sequence | MTTFASNTLA LGPDFISADS LAKAGLVVVL LIVFAESGLL VGFFLPGDSL LFTLGLLISQ DEVSTPLWLA CALIGVAAVA GDQVGYLFGR KAGPALFRRP DSRLFRQEYV DQAHEFFEKH GGRSIVLARF VPIVRTFTPV IAGVSRMNYR TFVVYNVIGG LLWGCGVTVL GSLLGKIDFI RQNLEAMLIL IVLISVVPIL IEYLRARRTK ATTGDAAGSP DATNAAGTGP AGPAAGHGPA WVDGPVREHD RAPGAGFAGG YESTGGYQPA GGYQGGYQPV DVYQSADGYR NADGWQPESR YDDGRYDQPR AGTAGAAGHG GHGYDTEGFQ DARPREGEAP IQEERGPAGR RGGGGRHSAP RHR
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