Gene Franean1_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0014 
Symbol 
ID5668441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp20169 
End bp20873 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content77% 
IMG OID641238943 
ProductTetR family transcriptional regulator 
Protein accessionYP_001504389 
Protein GI158311881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.730336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCG ATGACCCGGC CGCGGAGTGT GTGCGGCCAC GTCGGGGCCG TCCTCGCGAC 
GCGACGATCG ACGACCGTGT GCTGCGGGCC GCCGTCGACG AACTGGCTGG TCGCGGCGTC
GGCGGGTTCA GCGTCAACAG CGTCGCCGCC CGCGCGGGCG TGGCGAAGCG GGGCATCTAC
ACCCGGTGGG CGACCAGGGA CGATCTCGTC CTCGCCGCAC TGGGCACGCT GGCCGCCGGC
CTCGTGCCGC CGCGCACCGG ATCCCTGCGC GAGGATCTCC TACGACTGGC ACCTCTGGTG
GACGCCGTCT TCACCGAGCC GCGGATGTCG ATCCTCGCCC GATGCCTGGC CGAGCTGCCC
CGGTACCCCG GGCTGTACGA GGCGTTCCGG CGGGAGTCGG TCGACCGCTG CGCGGCCGCC
GTGCAGGACG CGTTCCACGA CGCGCGGCGG CGCGGAGAGA TCCGCTCCGA CCTCGACACC
GACCTGGCCG CCGCCGCGTT CCTCGGCGCC CTGCTGACCC GTCAGGCCTT CGGGCGCCAG
GCGTTCGGGC GGCCGCGCGC CGGCCCGGGC GGCCCGGGCG GCCCGGGCGG CGAGCCGGGC
GAGCCGCCCG AGCCACCCGG TGCGGTCACG GCCTACCACC GCCGGCTCGT CGAGTTCTCC
CTCGCCGCGG CGAGGGGCGC CGGGCAGGCC TTTGGCCCCG CGTAG
 
Protein sequence
MPPDDPAAEC VRPRRGRPRD ATIDDRVLRA AVDELAGRGV GGFSVNSVAA RAGVAKRGIY 
TRWATRDDLV LAALGTLAAG LVPPRTGSLR EDLLRLAPLV DAVFTEPRMS ILARCLAELP
RYPGLYEAFR RESVDRCAAA VQDAFHDARR RGEIRSDLDT DLAAAAFLGA LLTRQAFGRQ
AFGRPRAGPG GPGGPGGEPG EPPEPPGAVT AYHRRLVEFS LAAARGAGQA FGPA