| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0007 |
|---|
| Symbol | |
|---|
| ID | 5668434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 9711 |
|---|
| End bp | 12224 |
|---|
| Gene Length | 2514 bp |
|---|
| Protein Length | 837 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641238935 |
|---|
| Product | DNA gyrase subunit A |
|---|
| Protein accession | YP_001504382 |
|---|
| Protein GI | 158311874 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.822047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGACG TCCTACCCCC GCCCCCCGGC GACCGCATCG AACCCATCGG CATCGAAGTC
GAGATGCAGC GGTCGTACCT CGACTACGCC ATGTCCGTCA TCGTCGGCCG TGCCCTGCCG
GAGGTGCGTG ACGGGTTGAA GCCCGTCCAC CGCAGGGTCC TGTACGCGAT GTACGACGGC
GGTTACCGGC CGGACCGGGG GTACTTCAAG TGCTCCCGCG TCGTCGGTGA CGTTATGGGT
AACTACCACC CGCACGGCGA CTCGGCGATC TACGACACGC TCGTCCGGCT CGCCCAGCCG
TGGTCGCTGC GTTACCCACT GGTCGACGGT AACGGCAACT TCGGCTCACC GGGCAACGAC
CCGCCCGCCG CCATGCGGTA CACCGAGGCC CGGATGGCGC CGCTGGCCAT GGAGATGCTG
CGCGACATCG ACCAGGAGAC GGTCGACTTC GCGCCGAACT ACGACGGCCG CTCGCAGGAG
CCGCTCGTCC TGCCCAGCCG CTTCCCCAAC CTGCTGGTGA ACGGCGCGGG CGGCATCGCC
GTCGGCATGG CGACCAACAT CCCGCCGCAC AACCTGGTCG AGGTCGCCAA GGGCGTGCAG
TGGTCCCTGG ACCACCCCGA GGCGACCGCC GAGGAGCTCC TCGAGGCGCT CCTGGGCATC
ATCAAGGGCC CGGACTTCCC GACCCACGGC CTGATCGTCG GGCGCAACGG CATCGAGGAC
GCCTACCGCA CCGGTCGCGG CAGCATCCGG ATGCGCGCCG TGGTCAACGT CGAGGAGAAC
AAGGGCCGCA CCCAGCTCGT CGTCACCGAG CTGCCGTACC AGGTCAACCC GGACAACCTC
GCCGAGAAGA TCGCCGAGCT CGTCCGTGAC AACAAGGTCA CCGGCATCTC GGACGTCCGC
GACGAGACGT CCGCGCGTAT CGGGCAGCGG CTCGTGATCG ACCTCAAGCG TGACGCCGTC
GCGAAGGTCG TGCTGAACAA CCTGTACAAG CACACCCAGC TGCAGGACAC CTTCGGCGTC
AACATGCTGG CGATCGTCGA CGGCGTGCCG CGCACCCTGC GGCTCGACCA GATGATCTCC
TACTACGTCG AGCACCAGGT CGACGTGATC GTCCGGCGGA CCCGCTACCA GCTGCGCAAG
GCGCGCGAGC GGCTGCACGT CCTCGACGGT CTGCTGATCG CGCTCGACCA CCTGGACGAG
GTCATCGCCC TCATCCGCAA CGCGGAGTCG GCGGAGGTCG CCCGCGGTCA GCTCATGGCG
CGCTTCTCGC TCTCCGAGAT CCAGGCCACC GCGATCCTCG ACATGCAGCT GCGCCGCCTG
GCGTTCCTCG AGCGCCAGCG CATCATCGAC GAGGCCGCCG AGCTGCGCGC CAAGATCGAT
GAGCTGGAGG CGATCCTCGC CTCGCCGGTG CGGCAGCGCG AGATCATCGG CCAGGAGCTG
GCCGAGGTGG TCGAGAAGTT CGGCGACGAG CGGCGGACGC GGCTCGTCCC GTTCGAGGGC
GACATGTCCG TCGAGGACCT CATCGCCCGC GAGGACGTCG TCGTCACGGT GACCCGCGGC
GGTTACGCCA AGCGGACCAA GACCGACCTC TACCGCTCGC AGAAGCGCGG CGGCAAGGGC
GTGCAGGGCG CGGCGCTGCG CGAGGACGAC ATCGTCGAGC ACTTCTTCGT CACGACGACG
CACCACTGGC TGCTGTTCTT CACCAACAAG GGCCGGGTCT ACCGGGCGAA GGCGCACGAG
CTGCCCGAGC AGGCACGCAG CGCCAAGGGG CAGCACGTCG CGAACATCCT CGCCTTCAGC
CAGGACGAGC GGATCGCCGA GGTGATGGCG ATCCAGGACT ACCAGGCCGC CCCCTACCTG
GTGCTCGCCA CCAAGCGCGG CCTGTGCAAG AAGACGGCGC TGACCGACTT CGACTCCAAC
CGCGCCGGCG GCCTGGTCGC CATCAACCTG CGTGACGACG ACGAGCTGAT CTCCGCCCGT
CTCGTCGCTC CCGGTGACGA CCTGCTGCTG GTCAGCCGCA ACGCCCAGTC CATCCGATTC
CACGCCGACG ACGAGCAGCT GCGGCCGATG GGACGGGCGA CGTCCGGCGT GATCGGCATG
CGGTTCGACG AGGCCGACGA ACTGCTCTCG ATGGACGTCG TCGTGCCGGA GAGCCCCGCG
GATCTGCTGG TCGCGACCAG TGGCGGCTAC GCGAAGCGGA CGCCGCTCGC CGAGTACCCC
ATCCAGGGCC GAGGCGGCAA GGGGGTCCTC ACGGCGAAGA TCGTGTCGAC CCGGGGCGGT
CTGGTCGGGG CGCTCGTCGT GGAGCCGAAC GACCAGCTCT ACGCCATCAC ATCCAATGGC
GGTGTGTTGC GTACCGTAGC GAAGGATGTT CGCCGGGCAC AACGGCAGAC GATGGGCGTA
CGGCTCATCG ACCTGGAGGC CGGTGTGCAG GTGGTCGGTG TGGCGCGCAA TGCTGATGCC
AACGACAGTG ACGGCGACGG CGAGACCGCC GGGTCGGACG GCACGGCGGG CTGA
|
|---|
| Protein sequence | MVDVLPPPPG DRIEPIGIEV EMQRSYLDYA MSVIVGRALP EVRDGLKPVH RRVLYAMYDG
GYRPDRGYFK CSRVVGDVMG NYHPHGDSAI YDTLVRLAQP WSLRYPLVDG NGNFGSPGND
PPAAMRYTEA RMAPLAMEML RDIDQETVDF APNYDGRSQE PLVLPSRFPN LLVNGAGGIA
VGMATNIPPH NLVEVAKGVQ WSLDHPEATA EELLEALLGI IKGPDFPTHG LIVGRNGIED
AYRTGRGSIR MRAVVNVEEN KGRTQLVVTE LPYQVNPDNL AEKIAELVRD NKVTGISDVR
DETSARIGQR LVIDLKRDAV AKVVLNNLYK HTQLQDTFGV NMLAIVDGVP RTLRLDQMIS
YYVEHQVDVI VRRTRYQLRK ARERLHVLDG LLIALDHLDE VIALIRNAES AEVARGQLMA
RFSLSEIQAT AILDMQLRRL AFLERQRIID EAAELRAKID ELEAILASPV RQREIIGQEL
AEVVEKFGDE RRTRLVPFEG DMSVEDLIAR EDVVVTVTRG GYAKRTKTDL YRSQKRGGKG
VQGAALREDD IVEHFFVTTT HHWLLFFTNK GRVYRAKAHE LPEQARSAKG QHVANILAFS
QDERIAEVMA IQDYQAAPYL VLATKRGLCK KTALTDFDSN RAGGLVAINL RDDDELISAR
LVAPGDDLLL VSRNAQSIRF HADDEQLRPM GRATSGVIGM RFDEADELLS MDVVVPESPA
DLLVATSGGY AKRTPLAEYP IQGRGGKGVL TAKIVSTRGG LVGALVVEPN DQLYAITSNG
GVLRTVAKDV RRAQRQTMGV RLIDLEAGVQ VVGVARNADA NDSDGDGETA GSDGTAG
|
|---|
| |