| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4257 |
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| Symbol | |
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| ID | 5664641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5171988 |
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| End bp | 5173625 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641238925 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001504102 |
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| Protein GI | 157964068 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000606394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCTC AACGCAATAT ATTGCTGATC GGTTTGCTGT TTGTCAGCTT TCTACTGTGG
CAACAGTGGC AAGCAGATAA AGCGCCTCAA CCGGTGGCTG CAGCTCAAAC TCAATCTTCT
ATCCCGGCTT CTACAGTAGC TGACGCTCAT AGTTCAGACG TACCTGATGC TGATTCAGCA
GTACCTGAAG CTACTCCAGC ATCTAAAGAA CTCATCACAG TTATTACAGA CCAACTAGAA
ATCAAAATTG ATCCTGTTGG CGGTGATATT GTTTACTCTG CTTTGCTTTC TCATAAGCTT
GAAGAAAAAG GTGACGATCC GTTCGTTCTT CTTGAGCAGA CAAACGATAT CTATTACATC
GCGCAAAGTG GCCTTATTGG TCGTGACGGT ATCGACAGCA GCGTAAAAGG TCGAGCTCAC
TTTGATAGCG CTTCACGTGA GTACAAATTG GCTGATGGCC AAGAGACACT TAACGTGCCA
CTAACTTATG TTAGTGATAA AGGCGTGGCT TATACCAAAG TTTTCGTTTT CACTCGCGGT
AAATACAACA TCGCTGTTGA TTACAAAATC AACAACACTT CTGATGCTCA GCTTCAAGTT
CAAATGTATG GACAAATTAA GCACAGCATC AAGAAGAGCG AAAGCAGCAT GATGATGCCA
ACTTACCGTG GTGGTGCATT CTCAACAGCG GACACTCGCT ATGAGAAGTA CAGCTTCGAT
GATATGGCAG ATAAGAACCT AGACAAGTCA ACACTTGGCG GTTGGGTTGC TATGCTTCAG
CATTACTTTG TATCAGCATG GGTACCACCT GCGAACGATA AGAACATTAT CTTCTCAAGT
GTCAGTGCTG GTGGTCTAGC TAACATAGGT TTCCGTGGTG CACTTTACGA TATCGCACCT
GGTACTGAAC AAAGCATTAA AGCTGAATTC TATGTTGGTC CTAAAGATCA AGAAGCCCTA
TCGGCACTTT CTCCATCACT GAATCTAGTA GTAGATTATG GTTTCCTTTG GTGGTTAGCA
GTACCTATCT ACAAACTATT GATGTTCTTC CAATCAATCG TTGGTAACTG GGGTATCGCT
ATTATCCTAA TCACTCTAAC TGTTCGTGGT ATGTTATATC CGCTAACGAA AGCGCAATAC
ACCTCTATGG CGAAAATGCG TAATCTGCAG CCTAAGCTTG CCGAACTAAA AGAGCGCTTT
GGTGATGACC GTCAGAAGAT GGGTCAAGCT ATGATGGAAC TGTACAAGAA AGAGAAAGTG
AACCCTATGG GTGGCTGTCT TCCAATCTTG CTACAGATGC CAATCTTCAT CGCTCTATAC
TGGGTTCTAT TAGAAAGTGT TGAACTGCGT CATGCGCCAT TCATGCTTTG GATTACTGAC
TTATCAGTAC AAGATCCTTA CTATGTTATG CCTATCCTAA TGGGTATCTC GATGTTTGTG
ATGCAGAAGA TGCAGCCAAT GGCACCGACT ATGGATCCAA TGCAAGTTAA AATGATGCAG
TGGATGCCTG TAATCTTTAC CGTATTCTTC CTATGGTTCC CAGCAGGTCT GGTTCTATAC
TGGTTGGTAG GTAACTTAGT CGCGATTACC CAGCAGAAAA TTATCTATGC GGGTCTAGAG
AAAAAAGGGT TAAAATAA
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| Protein sequence | MESQRNILLI GLLFVSFLLW QQWQADKAPQ PVAAAQTQSS IPASTVADAH SSDVPDADSA
VPEATPASKE LITVITDQLE IKIDPVGGDI VYSALLSHKL EEKGDDPFVL LEQTNDIYYI
AQSGLIGRDG IDSSVKGRAH FDSASREYKL ADGQETLNVP LTYVSDKGVA YTKVFVFTRG
KYNIAVDYKI NNTSDAQLQV QMYGQIKHSI KKSESSMMMP TYRGGAFSTA DTRYEKYSFD
DMADKNLDKS TLGGWVAMLQ HYFVSAWVPP ANDKNIIFSS VSAGGLANIG FRGALYDIAP
GTEQSIKAEF YVGPKDQEAL SALSPSLNLV VDYGFLWWLA VPIYKLLMFF QSIVGNWGIA
IILITLTVRG MLYPLTKAQY TSMAKMRNLQ PKLAELKERF GDDRQKMGQA MMELYKKEKV
NPMGGCLPIL LQMPIFIALY WVLLESVELR HAPFMLWITD LSVQDPYYVM PILMGISMFV
MQKMQPMAPT MDPMQVKMMQ WMPVIFTVFF LWFPAGLVLY WLVGNLVAIT QQKIIYAGLE
KKGLK
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