Gene Spea_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4221 
Symbol 
ID5664605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp5128588 
End bp5129037 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content41% 
IMG OID641238885 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001504066 
Protein GI157964032 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAA CTCGTTACAC AGATTATGGC TTAAGAACGC TGATGTATTT GGCATTGCAT 
TCAGAGCGTG AGTCGCTCTT CCGTATTGCT GAAATCACTG AAGTATTCGA TCTGTCTGCT 
AACCACATCT CTAAGGTTGT TCATCACTTA GGGAAATTAG GCTATTTGCA AACCGTTCGT 
GGTAAGAGTG GTGGCTTTAA ACTAGCTAAA CCAGCTTCTG AAATAAATAT TGGCCAAGTC 
GTTCGAGCGC TAGAAAATTC TTTGGCGCCA ATTGATTGTA GTAAGCCATA CTGCCTGTTT 
ACACCAGCTT GTAAGCTTAG GGGAGCGTTA GCCGATGCAG TGAATGCTTA TTTAGCGGTT 
TTAGATGGCT ATACCTTAGA TATGATTGTC ACTAATAAGC AGGAGTTAAA ATCTCTGCTA 
CCTGATCTAT CAATCTCAAT CCTGCAATAA
 
Protein sequence
MQLTRYTDYG LRTLMYLALH SERESLFRIA EITEVFDLSA NHISKVVHHL GKLGYLQTVR 
GKSGGFKLAK PASEINIGQV VRALENSLAP IDCSKPYCLF TPACKLRGAL ADAVNAYLAV 
LDGYTLDMIV TNKQELKSLL PDLSISILQ