| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4192 |
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| Symbol | |
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| ID | 5664576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 5087376 |
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| End bp | 5088521 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238856 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001504037 |
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| Protein GI | 157964003 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.148286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA AAATAATTTC TATGATCCGC AAGGAGCTGA TCGACGCCGC TCGTGATAAA
CGCTCTGTGA TGGCGGGCCT CTACTACGCT ATGGGCGCCC CGCTGCTGAT GTGTGGCATG
TTCTTTCTGC TGATCGGTCA GCTAACCAGC CCTGAAGATC TCAATATTAA AATCGATAAT
GCACAGGGCG CACCCGATCT GGTGAAGTTC CTGTCTAGTC GTGGCATTTC TCAGGGTGAT
GACACTGAAA AAGCAGACAC TAAAGACATT CAACTCATCA TCAGCCAAGA CTATGCCGCC
AATATGGCCA AGGGTCTTAG CGCCGAAGTG ACGCTGATTG CCGATGCCTC CGATGAGAAA
CTGCAGATCT CAATTCGACG TCTCAAAAAT AGTCTGCTGG AATACAGCTC AGAGATGGGC
AGCCTACGCC TAATTGCTCG TGGTATCGAC CCAAGAGTGA TGCAGCCGTT AAAGCTCAAT
ATTGAAGATG AAGCCACTCC AGATTCTAAG GCCGGCATGA TCTTAGGCCT AGCAACCATG
ACCATGATCT ATGCGGTATT TATCTCTGGT ATGAACCTGG CCATCGACAC CAGCGCCGGC
GAGCGCGAGC GTAACTCGTT AGCGCTACTA CTGAGCCACC CGGTTTCTAC TTGGGAAATC
GTTATCGCTA AAGTAACCGC GGTAACTATC TTTGCCATGG TGGGGCTCGT GCTGACGCTA
ATCGTGTCTA AATTTGCCTA TGCCTTTGTG CCTTGGCAGG AGCTTGGCTT TGCCGTGAGC
GTTAATACCA GCTTTATGCT GATGATGCTT ATTGTCGGTG CGCCAGTAGC GATTATGGCG
GCGTGCTTGC AGCTGTTTGT CTCCTTTATG GCTAAGAGCT TTAAGGAAGC CCAGTCTTAC
ATCACGATCG TGTTAATGGT GCCTATGATG TTAGCCATGG CCGCCAGCTA CAACATCGCG
CCGGAGACCA TTCAGTGGTT ACCTGTATCG GGCCAACTTC AGGCTCTTAT TGAGTTTATT
AAGGGCCGTG AGCTGCCAAT GTTGCAACTT GCCGTTTCAT CGGCGTCGAC GCTAGCGATT
GCCTTAGGAC TTGCTATCGG TATGCAAAAA TCGCTCAAGA GCGAGAAGAT CGTCTTTGGT
TTATAA
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| Protein sequence | MSNKIISMIR KELIDAARDK RSVMAGLYYA MGAPLLMCGM FFLLIGQLTS PEDLNIKIDN
AQGAPDLVKF LSSRGISQGD DTEKADTKDI QLIISQDYAA NMAKGLSAEV TLIADASDEK
LQISIRRLKN SLLEYSSEMG SLRLIARGID PRVMQPLKLN IEDEATPDSK AGMILGLATM
TMIYAVFISG MNLAIDTSAG ERERNSLALL LSHPVSTWEI VIAKVTAVTI FAMVGLVLTL
IVSKFAYAFV PWQELGFAVS VNTSFMLMML IVGAPVAIMA ACLQLFVSFM AKSFKEAQSY
ITIVLMVPMM LAMAASYNIA PETIQWLPVS GQLQALIEFI KGRELPMLQL AVSSASTLAI
ALGLAIGMQK SLKSEKIVFG L
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