| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4114 |
|---|
| Symbol | |
|---|
| ID | 5664498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 5000048 |
|---|
| End bp | 5000728 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641238778 |
|---|
| Product | molybdate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001503959 |
|---|
| Protein GI | 157963925 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4149] ABC-type molybdate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR02141] molybdate ABC transporter, permease protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGG AAGCGTTACT GCTATCGATT AAGCTCAGCA GCGTGACTGT GCTTATCTTG
ATCCCGTTAG CGATTCTAGC GGGGCGTTTT CTGGCTTATC GGCATTTTCC CGGTAAGTCA
TGGGTCGAAG CCTTAGTCAT GGTGCCACTG GTGTTGCCAC CAACGGTTAT CGGCTACTAC
CTGCTGGTGG GGCTCGGTAG CGAATCTTGG CTTGGCCGCA TGTTAGAGCA ACTGCTTGGC
CACCAACTGG TATTTCACTT CTCAGGGCTG GTGGTTGCCT CCATCTTAGT CAATATTCCT
TTTGCGATTC AGCCAATTCA GCGTGCTTTT GAAGCTGTGC CTGAAGATGT GCGTGACGCC
GCGGCCTGCT GCGGTATGAG CCGACTTAAG GTGCTATTTA AGATCGAACT GCCTATGGTT
TGGCCGGGCG TATTAACCGC CATCGTATTG TGTTTTTCTC ATGTACTCGG TGAGTTTGGT
GTGGTGCTGA TGATGGGCGG TAATATTGCT GGCGAAACCA AGACCATTGC CATCTCAATT
TACGACAGCG TACAGGCATT CGATTTTGCC AGTGCGGGCA ATATGTCGCT GGTACTCTTA
CTGTTTGCGG TTACGGTATT GGCGTTAACA ACCAGCCTAT CGCGCCGTGT TGGAGGTCAG
CATGTCGCAA ATCGTCGCTG A
|
|---|
| Protein sequence | MDWEALLLSI KLSSVTVLIL IPLAILAGRF LAYRHFPGKS WVEALVMVPL VLPPTVIGYY
LLVGLGSESW LGRMLEQLLG HQLVFHFSGL VVASILVNIP FAIQPIQRAF EAVPEDVRDA
AACCGMSRLK VLFKIELPMV WPGVLTAIVL CFSHVLGEFG VVLMMGGNIA GETKTIAISI
YDSVQAFDFA SAGNMSLVLL LFAVTVLALT TSLSRRVGGQ HVANRR
|
|---|
| |