Gene Spea_4090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4090 
Symbol 
ID5664474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4973090 
End bp4973749 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID641238754 
Producthypothetical protein 
Protein accessionYP_001503935 
Protein GI157963901 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATGT TGACCCATGC ACAGGTTCGC CGTGCATTAC TGCTATTAGC AGGCTTTCAT 
ATTGTTATTA TTTGTGCGAG TAACTACCTT GTACAACTTC CCTTTCAAAT ATTTGGCTTC 
CATACCACAT GGGGAGCATT TAGCTTTCCA TTTGTGTACT TAGCGACTGA CCTTACGGTG 
AGAATTTTTG GCCAGCAAGC TGCGAGAAAG ATCATCTTCC TTGCCATGCT ACCGGCCCTC 
ATCATCTCTT ACTTGATGGG GGTGATCTTT CACCAAGGCA GCTTTCAAGG TGCTGAGGCG 
CTGCTTGAGT TCAATAACTT TGTATTCCGT ATTGCCTTTG CAAGCTTCGC GGCATATCTA 
GTGGGCCAGC TGATGGATAT CTTCGTATTT GCCAAGCTTA GAGAGACTAA GTCTTGGTGG 
GTCGCACCAT CAGCTTCCAC TATCGTTGGT AACCTGATAG ACACGATTGT GTTCTTCGGC 
CTAGCTTTCT ACGCCTCAAC AGATGAGTTT ATGGCAACAC ACTGGCCTGA AATTGCCACC 
GTTGATTACG GATTTAAGTT AATTGTTAGC TTAGGCCTAT TTTTACCAGC CTACGGTCTG 
TTATTAAAGT TCTTACAAGA TAAGATCTTA CAAGATGCCG CTCGTAAAAC CGCCATCTAA
 
Protein sequence
MLMLTHAQVR RALLLLAGFH IVIICASNYL VQLPFQIFGF HTTWGAFSFP FVYLATDLTV 
RIFGQQAARK IIFLAMLPAL IISYLMGVIF HQGSFQGAEA LLEFNNFVFR IAFASFAAYL 
VGQLMDIFVF AKLRETKSWW VAPSASTIVG NLIDTIVFFG LAFYASTDEF MATHWPEIAT 
VDYGFKLIVS LGLFLPAYGL LLKFLQDKIL QDAARKTAI