Gene Spea_4035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4035 
SymbolcaiC 
ID5664419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4899535 
End bp4901088 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content41% 
IMG OID641238699 
Productputative crotonobetaine/carnitine-CoA ligase 
Protein accessionYP_001503880 
Protein GI157963846 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.948769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCG TTGGTAGCAA AACATTAAGA TGCATGTGGG AAGAGCGTGC TCGCAAATTC 
AGTAATAACA CAGCGTTGGT TTATGAGGAT GCTGCTGGCG ATGTCCAAGA ATATACTTAT
AGTCATTTAA ATGCCGAAAT AAATAGAGCG GCAAATTTAT TCCTTAGCTT AGGAATTAAT
AAAGGCGATA AAGTAGCTGT ACAGTTATAT AACAGTCCAC AATTTATTTT CTGCTGGTTT
GGGTTAGCTA AGATAGGTGC GGTAATCGTG CCTATTAATA ACCAATACCT GTTTGCAGAG
TGCCAATACA TTATTAATAA GTGTGCTGTT AAAGCTGTTG TTATTGAGGA AGAGTTCCTA
CCCATCTATA CACGGATGAA ACAAGAAACA GATAACACAA TAAATAATAT ATTGGTTACA
AGAACGACTA ACCCAGAGAT ATCGGACTCG ATGAACTTCG ATACTTTGCT AAGTCAGCAA
GTTGTAGAAT TAATTCAGCG CGTGACGATT AGTAGTGACG ATGTGGCCGA AATATTATTT
ACCTCAGGTA CAACATCACG GCCTAAAGGC GTGGAGATCA CCCACTGTAA CTTGCAGTTT
GCAGGTTACT TTACGGCGTG GCAAACCTGC CTTCGTAGTG ATGATATTTA TTTGACCATG
ATGCCAAGCT TTCACATCGA TTTTCAATGT AATGCAGCCA TGGCTACATT CACCGTTGGC
GCTAAGTTAG TGATGCTTGA GAAGTACAGT GCCCGCAAGT TCTGGAAACA GATCTGTGAC
TATAGAGCCA CGATTACTCA TAGCATGCCG ATGATCGTGC GTACCTTGAT GTTACAGCCT
ACAACACCAT TTGAACGTGA TCATTGCCTG CGTGATATGT TGTTTTTCCT ACATATATCA
GACCAAGAAA AACTGGATTT TGAAACACGC TTTAACGTGC AGCTGTTTAA CTCCTACGGG
ATGACAGAAA CCTTAGTCGG ACTGATTGGT GATAGTCCAG CCGAGGAGCG TCACTGGCCG
TCAATTGGAC GACCTGGGTT AGGTTATGAG GCTAAGATCG CCGATGAGAA TGGTCAAGAG
CTTGCCCCGA ATGTGATTGG CGATCTCTGG GTTAAAGGTG TGCCCGGTAG AACGATCATG
AAGGGCTACT ACCAAGATAC GAAAGCGACC GAGGAAGTAC TCAGTGCCGA GGGGTGGCTC
TACACTGGCG ATAAGGCTTA TGTAGATGAC AATGGCTTAT TTTATTTTGT CGATAGAAAG
ACAAATATGA TTAAGCGCTC CGGTGAGAAC ATCTCCAGTA GTGAAATAGA AAAAGTTTTA
ATGTCTCACC CTTATATTCT CGATGCCGCA GTTATTGGTG TGCCAGATTT AATTCGAGAT
GAAGCCGTTA AAGCATTTGT CATATTTAAT GAGGGTGTGT CTTTAAGTGT CGAACAAATT
TTGCAGTATT GCGCTGAAAA TATGGCGAAG TTTAAAGTTC CATCTTTTGT TGAAATAAAA
AAGTCTTTCC CAAGAACCTG TACCTGCAAA GTACAAAAAA AACTTCTTAT GTGA
 
Protein sequence
MDIVGSKTLR CMWEERARKF SNNTALVYED AAGDVQEYTY SHLNAEINRA ANLFLSLGIN 
KGDKVAVQLY NSPQFIFCWF GLAKIGAVIV PINNQYLFAE CQYIINKCAV KAVVIEEEFL
PIYTRMKQET DNTINNILVT RTTNPEISDS MNFDTLLSQQ VVELIQRVTI SSDDVAEILF
TSGTTSRPKG VEITHCNLQF AGYFTAWQTC LRSDDIYLTM MPSFHIDFQC NAAMATFTVG
AKLVMLEKYS ARKFWKQICD YRATITHSMP MIVRTLMLQP TTPFERDHCL RDMLFFLHIS
DQEKLDFETR FNVQLFNSYG MTETLVGLIG DSPAEERHWP SIGRPGLGYE AKIADENGQE
LAPNVIGDLW VKGVPGRTIM KGYYQDTKAT EEVLSAEGWL YTGDKAYVDD NGLFYFVDRK
TNMIKRSGEN ISSSEIEKVL MSHPYILDAA VIGVPDLIRD EAVKAFVIFN EGVSLSVEQI
LQYCAENMAK FKVPSFVEIK KSFPRTCTCK VQKKLLM