Gene Spea_4029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4029 
Symbol 
ID5664413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4893986 
End bp4894609 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content48% 
IMG OID641238693 
Productdisulphide bond formation protein DsbB 
Protein accessionYP_001503874 
Protein GI157963840 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTA AAGAGTTCTG GGGGCAGTTT AAGGCTACCC CAGCCGACAG TTTAACGCAC 
ATGCAAGACC ATCGACCGAT CTGGTTAGTG ATGGTTGGCG GAGCACTATT TCTTATTCTG 
TCGGCTATCT TTTACTTCCA GCTATTTCTG GCGATGGATC CCTGTGAGCT ATGTGTTTAC 
ATTCGCTTCA GCCAGTGCTG TATCGTGCTT GCGGGCTTGA TCATTTTGAT CGACCCAAAG 
AATCACATAC TAAAGTTCTT GGGCTTATTA CTGGCATGGT ACGCGGTGAT CCAAGGCTGG 
ATGTGGTCTT ATGAACTGAT GAAGATCCAT GATGCTGCAC ATATGGTTGT CGATGAGTCG 
ATGGACTTCT TTGCTGCTGC AGGTGATGCA GCAGGTTCAG CTTGCTCAAC CGATCCTCGC 
TTCCCACTCA ATCTTCCACT TGATGAGTGG TTACCGTTTG AGTTCGCACC AACGGGTGGT 
TGTGGTGAAG ATGATTGGTC ACTACTCGGC ATGAACATGG CGCACTACTG CATGATCGCT 
TACACCGTAT TTATGGTCTG TTTAGCGCCA CTGACTTTGG GTTGGGTTCG CTCACTGAAG 
AAACTTCTTC CGTTTAAGAA GTAA
 
Protein sequence
MSIKEFWGQF KATPADSLTH MQDHRPIWLV MVGGALFLIL SAIFYFQLFL AMDPCELCVY 
IRFSQCCIVL AGLIILIDPK NHILKFLGLL LAWYAVIQGW MWSYELMKIH DAAHMVVDES 
MDFFAAAGDA AGSACSTDPR FPLNLPLDEW LPFEFAPTGG CGEDDWSLLG MNMAHYCMIA 
YTVFMVCLAP LTLGWVRSLK KLLPFKK