| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4015 |
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| Symbol | |
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| ID | 5664399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4876362 |
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| End bp | 4878773 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238679 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001503860 |
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| Protein GI | 157963826 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATGGG CTGTGGTATC TTTGGCAAAA TCCCCTTTAT CAACTAGGCT CGACCTCTAT
CTTATGCAAA ATATTGCACA GCTCATCGCT GAAGAACTGA ACGTTCGTCA GCAACAAGTT
ATCGATACCA TTTCATTACT CGACGATGGC GCAACAGTGC CGTTTATCGC ACGTTACCGT
AAAGAAGCCA CTGGTGGCTT AGATGATGCG CAATTGCGTA CTCTATACAG CCGTTTAGGT
TATCTACGTG ATCTGAATGA TCGTCGTAAC GTGATTTTAT CGAGCATCGA AGCCCAGAGT
AAGTTAACAC CTGAGTTGCA AGCGGCAATC AATGCAGCAG ATAGTAAGAC GCGTCTAGAA
GATCTCTATT TACCTTACAA GCCAAAACGC CGTACCAAGG GCCTTATCGC CATTGAAGCG
GGGATCGAGC CTTTGGCTGA CTACCTGTTG GCAAACCGAC AGGTAGATTG CGAAGCGGTT
GCTAGCGAAT ATATCAATGC CGAGGCCGGC TTTGCCGATG CTAAGGCGGT ACTCGATGGT
GCACGCTTTA TCTTGATGGA GCGTTTTGCT GAAGATGCCG AATTACTGCA AAAAATTCGC
GTACAAGTAG AACAAAATGC TGTGTTTGAA AGCCGCATGG TTAAAGGTAA AGAGAAAGAG
GGCGCTAAGT TTAGAGATTA CTTCGAGCAC TCTGAAAAGC TGACTAAAGT GCCATCTCAC
CGTGCACTTG CCATGCTACG CGGACGTAAT GAAGGCATGT TAAGCCTCAA TATCAATGCC
GATCCGCATC AAGAGCCTAA GCAAGCTAGT TACTGTGAAG TGATTATTAT CGAGCACTTT
AAGTTAGGCT TAACAGATAG CGCCGTTGAT ACATGGTTAA AGACCGTTGT TGCGGCAACG
TGGAAAGTTA AAATCGCCCT GCAAATGGAA ACTGAGTTTC TTGGTCGCAT GCGTGATACC
GCTGAGCAAG AAGCAATTAA GGTTTTTGCC CGCAACTTAG GCGATCTATT GATGGCAGCT
CCTGCCGGTG CTAAAGCGAC CCTAGGTTTA GATCCGGGTC TTCGCTCAGG TGTGAAAGTC
GCTATCGTCA ACGACACCGG CAAGTTGATG GCACACACGA CTATCTTCCC GCATGCCCCA
CAAAACCAGT GGGATAAGTC GGTAAGAACC TTAGCTAACC TTGTGAAGAT GCATAAGGTT
GAGTTGATTG CTATCGGTAA CGGTACAGCC TCACGTGAAA CCGATAAACT AGCTGCCGAT
CTGATCAGCC AAGTAAAGGC TGAGCTACCT AGACTGACTA AGATTATGGT CAGCGAAGCG
GGCGCTTCAG TGTATTCAGC ATCTGAGCTA GCCTCGGAAG AGTTCCCGAA TATCGATGTT
TCGATCCGCG GCGCGGTATC GATTGCTCGT CGTCTGCAAG ATCCATTAGC CGAGCTAGTG
AAGATTGAGC CAAAGGCGAT TGGTGTGGGT CAGTATCAAC ACGATGTAAG CCAGAGTCAG
TTATCAAGCT CGCTAGAAGC GGTTGTCGAA GACTGTGTGA ATGGCGTAGG CGTAGATGTG
AATATGGCAT CTGCTGCGTT GCTGGCTCAG GTTGCGGGTC TTAATAAAAC CTTGGCACGT
AACATTGTGA CCCATCGTGA CGAGCAAGGC CGTTTCAACA ACCGTAAAGC GCTGCTTAAA
GTGGCACGCC TTGGGCCTAA AGCCTATGAG CAGGCAGCGG GCTTCTTACG TATTAGTGAA
GGGGATAACC CACTCGACGG CTCTTCGGTG CATCCAGAGG CCTACTCATT AGTTGAGTCG
ATTGCAGCGG CTAAAGGTGT GTCGGTTGCC GAGCTAATCG GTAACTCAGA GCTACTTAAG
GCGCTAGAAG CCAAAGATTT TATCACCAGT GAATTTGGTC TGCCCACAGT GACAGATATT
CTCGCCGAGC TGGATAAGCC GGGACGCGAT CCTCGTGGTG AATTTAAAAC CGCCACTTTT
AAAGAGGGCG TTGAAGAGAT CAAAGACCTT AAACTGGATA TGATCTTAGA AGGTGTGGTA
ACTAACGTGA CTAACTTCGG TGCTTTCGTC GATGTGGGCG TGCATCAAGA TGGTTTAGTC
CATATCTCAT CGATGACCGA CAAGTTTATT GACGATCCGC ACAAGGTGGT TAAAGCCGGT
GATATCGTTA AAGTTAAGGT CATGGAAGTT GATGCAGAAC GTCGCCGTAT CGGCCTAAGT
ATGCGCCTCG ATGATAAGGC TGGCGATGCA CCTAAGAGTG CGCCGCGTCC AGCAAACCAC
CAAAACAAAG GTGCCCCTAA TAAAGGCGCT AATCAGCAGC GTGGCCAGCA AAAGACTCAC
AAACCTAAGC AGCAGGCTAA TGCCGCTATG GGTAATGCCT TTGCCGATGC GTTCGCTAAA
CTGAAGAAGT AA
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| Protein sequence | MPWAVVSLAK SPLSTRLDLY LMQNIAQLIA EELNVRQQQV IDTISLLDDG ATVPFIARYR
KEATGGLDDA QLRTLYSRLG YLRDLNDRRN VILSSIEAQS KLTPELQAAI NAADSKTRLE
DLYLPYKPKR RTKGLIAIEA GIEPLADYLL ANRQVDCEAV ASEYINAEAG FADAKAVLDG
ARFILMERFA EDAELLQKIR VQVEQNAVFE SRMVKGKEKE GAKFRDYFEH SEKLTKVPSH
RALAMLRGRN EGMLSLNINA DPHQEPKQAS YCEVIIIEHF KLGLTDSAVD TWLKTVVAAT
WKVKIALQME TEFLGRMRDT AEQEAIKVFA RNLGDLLMAA PAGAKATLGL DPGLRSGVKV
AIVNDTGKLM AHTTIFPHAP QNQWDKSVRT LANLVKMHKV ELIAIGNGTA SRETDKLAAD
LISQVKAELP RLTKIMVSEA GASVYSASEL ASEEFPNIDV SIRGAVSIAR RLQDPLAELV
KIEPKAIGVG QYQHDVSQSQ LSSSLEAVVE DCVNGVGVDV NMASAALLAQ VAGLNKTLAR
NIVTHRDEQG RFNNRKALLK VARLGPKAYE QAAGFLRISE GDNPLDGSSV HPEAYSLVES
IAAAKGVSVA ELIGNSELLK ALEAKDFITS EFGLPTVTDI LAELDKPGRD PRGEFKTATF
KEGVEEIKDL KLDMILEGVV TNVTNFGAFV DVGVHQDGLV HISSMTDKFI DDPHKVVKAG
DIVKVKVMEV DAERRRIGLS MRLDDKAGDA PKSAPRPANH QNKGAPNKGA NQQRGQQKTH
KPKQQANAAM GNAFADAFAK LKK
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