| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3971 |
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| Symbol | |
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| ID | 5664355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4824773 |
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| End bp | 4826500 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238635 |
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| Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
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| Protein accession | YP_001503816 |
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| Protein GI | 157963782 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACGGT ACTCATCTAT GCAAACTGAA CACACCGCTG AACTTAATCT GCTTTGGGGA
ACTTTAATTT TAGAGGAGTT GGCTCGATTA GGCGTTAAAC ATGTCTGTAT GGCGCCAGGT
TCTCGCTCCA CCCCACTTAC CCTTGCTGCG GCGAAGCAAA CTAAGCTTAG CCAACACATT
CATTTTGATG AGCGAGGACT CGGCTTTATG GCGCTTGGTT TGGCTAAGGC CAGTCAAGCA
CCTGTTGCGA TAATTACCAC TTCTGGTACC GCGGTTGCCA ATCTTTACCC TGCAGTGATA
GAAGCTTGGC TTACTCACGT ACCGTTAATT GTATTATCTG GCGATAGACC TCCAGAGCTT
ATTGACTGCG GCGCCAATCA GGCGATCATT CAGCCTGCCA TTTTTGCTCA GTATGCCAAA
CAGATAAATC TACCGACCCC AGATCTCAAT ATTGCTCCTC AGGCACTGCT AAGCCTGCTA
GATGAAGCGA TTTGCAACCA ATCACAGCCG GTTCATATCA ACTGTATGTA CCGTGAGCCT
TTGTACCCTA ATGAACCTAA GGTAGATTTT GAGCATTACT TAGCGCCAGT TAAACAGTGG
CAACAACACA CAGCGCCCTA TAGCCAATTT GCCAATCTAA CTAGCGGCCT GATGCCAACA
GCCGATGCAC TCGCGCGCTT TGTACATGGT AAAGGTGTGA TTGTAGCGGC AACCTTAGCC
CCTGAGCAGA AGCCAGAGCA GCTGATTGAA CTCGCGCAAA AGCTAGGTTG GCCAATCGTC
ACCGATGCCC AGTCGCAGCT CAGGCAGCAT CCTGCAGCCA TAGGTAATAT CGATCAGCTA
CTGCATCAAC CAAAATCTAA GGCTCTGCTC GCTCAGGCAG AAAGAGTCAT CGTCTTCGGT
GGTCGTATTC TTTCTAAACG GCTTATCGGC TATCTAGCTG AGCAGAATTG GAAAGATTAT
TGGCAGGTGC TACCACAGCA ACAGAGGCTA GACCCGAGCC ACAAACCTAA AAAGGTTTGG
ATTGCAGCTG CGCACCAATT TGCCAAGCTC GCTTGGCCAA GATCCTCACA GGCCAATTGG
GCACTCAAGC TTGTACAGCA CAACGATGAT CTAGAAACGC TGTATCAACA GCAAATTGAT
AACGCCGAAT TTGGTGAGGC GCAGACGATT CGTGCTATTG CTAAGCGACA AACCGCTGAG
CAGCACCTGT TTATCGGCAA TAGTCTACCA GTGCGCCTAT ATGACATGTT TGCGCCTATT
ACCACTTCAA GTGCCAATGT ATTTACCAAT CGCGGCGCAT CGGGTATCGA TGGCTTATTA
GCAACGGCCT GCGGAGTCGC GGCAGCAGAG GGCAAGCCGA CCAGCCTGAT TATTGGTGAT
ATATCGGCGC TGCACGATCT CAACTCATTA GCCATTGCAC GCTCGGTCAC CAGCCCGCTA
GTAATCGTCA TACTCAATAA TGACGGCGGT AATATCTTTA ACCTGCTTCC GGTGCCTAAC
GAGCAGCTCA GAACCGACTA CTATCGCCTG TCTCACGGGT TGGAGTTTGG TTTCGGTGCC
GCCATGTTCG GCCTTGCTTA TAATCAAGTC GATTCAATTA GCGACTTTAT TGAGTCTTAC
GAATACGCCA TGACCTATTC AGGCCCCTCG GTTATTGAGG TTACTGTGGC ACAAGACCAA
GCCAGTGAGC AGATAGCTCA AATAGCTAGC TGGGTAAAAC AGAGCTAA
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| Protein sequence | MIRYSSMQTE HTAELNLLWG TLILEELARL GVKHVCMAPG SRSTPLTLAA AKQTKLSQHI
HFDERGLGFM ALGLAKASQA PVAIITTSGT AVANLYPAVI EAWLTHVPLI VLSGDRPPEL
IDCGANQAII QPAIFAQYAK QINLPTPDLN IAPQALLSLL DEAICNQSQP VHINCMYREP
LYPNEPKVDF EHYLAPVKQW QQHTAPYSQF ANLTSGLMPT ADALARFVHG KGVIVAATLA
PEQKPEQLIE LAQKLGWPIV TDAQSQLRQH PAAIGNIDQL LHQPKSKALL AQAERVIVFG
GRILSKRLIG YLAEQNWKDY WQVLPQQQRL DPSHKPKKVW IAAAHQFAKL AWPRSSQANW
ALKLVQHNDD LETLYQQQID NAEFGEAQTI RAIAKRQTAE QHLFIGNSLP VRLYDMFAPI
TTSSANVFTN RGASGIDGLL ATACGVAAAE GKPTSLIIGD ISALHDLNSL AIARSVTSPL
VIVILNNDGG NIFNLLPVPN EQLRTDYYRL SHGLEFGFGA AMFGLAYNQV DSISDFIESY
EYAMTYSGPS VIEVTVAQDQ ASEQIAQIAS WVKQS
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