| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3957 |
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| Symbol | |
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| ID | 5664341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4811857 |
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| End bp | 4812825 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238621 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503802 |
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| Protein GI | 157963768 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACTAG AAAATCTCGC ACGTATCGAT CTCAACCTAC TGGTTATTCT GCAAGTGCTT
TTGGAGGAGC AAAGCGTCAC CCGTGCCGCC AATCGCCTAC ACCTTAGTCA GTCTGCTCTG
AGTAAGAGCT TAAACCGCTT AAGGGAGACC CTAGGGGATC CACTTTTCCT GCGCACCGCT
CATGGACTTA AGCCAACAGC CCACGCAGTA CAGTTAGGCA AGATCCTCCC CCAAAGCCTA
CAAAGCTTGT ATCAACTAAC ACTACCGCCA AGCTTTACGC CCCATAACAG TAACCGTCAG
TTTTCATTTG CCATGGTGGA AAGCGCTTAC GAAACTTTGC TGCCTTACTT TATCGGCACC
TTACTCAATC GCGCCCCCAA CCTTAAGCTC GATAGCTTTG TATGGAGCGA AAATTCGATG
CAGGCGATTC AACAAGGGCA GATTGATTTC GGTATTGCCG GGCGTGAACT GCACCCACAG
TCTGCCTTTC AGGTGGATAG GCTACCCGAA GGCATCGCCC ATCAAACCCT GTTTACCGAT
CATCAGCTGT GTTTGGTTCG CCAAGATCAC CCCATCCTCT CGGCCGTAGC TGCCGGCCAT
TGGGATCTGA CTGTCTATCT CGAGATGTCA CATGTGCAGG TACGCTGCGA AGGCAATGAC
TGGTGGGCAC TGGACTATCA TCTGGCCGAT TTAGGTCACC ATCGCCGTTT AAGCACTATC
GTGCCCGATT TTTATGGCGC TGCGAGTGTT TGTGCCCATA GCGATCTGAT TTTTACCCTA
CCCGCGAGCT TTGCCCAACA TGCTAAGAAG CTCTATCCCT TAGTCGAGTT ACCGCTGCCG
ATTGAATTTA TTCCACTGGC CTACGTACTA CTCTGGCATG AGCGAAGTGC TGAAGATCCA
GGCCATGGAT GGGTTAAGGA GATTATTTGT GAAAGCGTTG CCAAGGCGTT TTTAAACAGT
CAAAATTGA
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| Protein sequence | MKLENLARID LNLLVILQVL LEEQSVTRAA NRLHLSQSAL SKSLNRLRET LGDPLFLRTA
HGLKPTAHAV QLGKILPQSL QSLYQLTLPP SFTPHNSNRQ FSFAMVESAY ETLLPYFIGT
LLNRAPNLKL DSFVWSENSM QAIQQGQIDF GIAGRELHPQ SAFQVDRLPE GIAHQTLFTD
HQLCLVRQDH PILSAVAAGH WDLTVYLEMS HVQVRCEGND WWALDYHLAD LGHHRRLSTI
VPDFYGAASV CAHSDLIFTL PASFAQHAKK LYPLVELPLP IEFIPLAYVL LWHERSAEDP
GHGWVKEIIC ESVAKAFLNS QN
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