Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3943 |
Symbol | |
ID | 5664327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4793708 |
End bp | 4795261 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238607 |
Product | hypothetical protein |
Protein accession | YP_001503788 |
Protein GI | 157963754 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGTTA AAAATAGACT CGCTCAGATA ACTCGTGACC CTAACCTTTC GCCAAAGCAA AAATCTAACT TCTTAGCCTT AGAAGCTGAG GCTAGCCTGC CCTATATGGC GATCTCCGAT GCAGTATCTG AAGCTAAAAA TAGCGGCATT ATCTGTGATA TGTTTGAAGG CAACGCACCA TTCAAGCCAA GATATGTGCT ACCCGATTAC GCCAAGTTTC TTCAGAATGG TTCTGAGTAC TTAGAGCTAA GTCCGGCGCA GGACTTAGAT GAAGCACTTA ATGCTCTGAC GATTATTTAT CACCACGTGC CATCGGTCAC CAATATTCCC GTCTATCTCG GTCAGCTCGA CGATATTTTG CTGCCATTCT GCCAAGGCCT AGAGCCTGAA GCTATTTACC GCAAGTTAAA GCTATTCTGG ATCATGCTAG ATCGCACCTT GCCGGATGCC TTTATGCACG TAAACATAGG CCCGACTGAC AATATCGTTT GTCGTACCAT TTTACGCGTC GATGCAGAGC TTAAGCAGAT AGCCCCCAAT CTGACTTTTA TGTATGACCC AGAGATCACC CCTGATGAAC TACTACAAGT CGCCGCCAGC AATATCTGTG AGTGCAGCAA GCCGCATATC GCCAACTACC CACTGCACGC CAATAGCTTC GATGACAAAG GCTTTGGTAT CGTCAGCTGC TATAACTCAC TGCCACTCGC TGGCGGCGCG AATACCTTAG TCAGACTGAA CCTGAAACAA GTTGCGTTAA AAGCAAGCAG TGTGGGCGAC TTTTTTACCC AAGTTCTGCC GCACTATTGC CAGCTGACTT ACGAGTTAAT CGATGCTCGC GCTAAGTTCT TGCATGAAGA GTCCAATTTC TTCAACAGTT TCTTAGTCAA AGAGGGCCTG ATTGAAGAGT CCCGTTTCGC GCCTATGTTT GGCATCTACG GCATGGCCGA AGCGGTCAAT ATCTTGCAAG GATCGCCTGA CTTTAATGAA GACAACATAG ATAAGCCTAG CAGCCATTAT GGCCATAATG CCGCTGCCAA CGCGCTGGGC CACAAGATCT CCAAAGCCCT AGATGGCATA GTGAAATCGA CTCAGGTGAA ATACGGTTAT AACGGCCTCG CCCTGCTACA TTCACAGGGC GGGATCAGTA TAGATAAAGA TGTGACACCG GGTGTGCGTA TTCCATATGG CACAGAACCA AACCCGATCG CCCATATTCA AGCGCTAGCC GAGCATCACC AGTATTACAC CTCTGGTATT AGCGACATCC TCACCATAGA TGAGACGGTA AAAGCTAACC CGCAGGCAAT GATGCAGCTG TGTAAAGGTG CGCTAAGCCT AGGTTTCCGT GAGTTTACCG CCAACGTAGC CTCAAATGAT TTGGTTCGCG TCACCGGTTA TATGATCAAA CTTTCAGATA TCGCTAGCTT TAAGGCTGAG GGCTCACGCA CCAACACCAC CTGGTTAGGT GCTGAGGCTG CGCAAAACAC CAAAATTTTA GAGCGTCAGC CAAGAGTTGT TGCCCATGAG CACACACCGG CATATAGCAA GTAA
|
Protein sequence | MTVKNRLAQI TRDPNLSPKQ KSNFLALEAE ASLPYMAISD AVSEAKNSGI ICDMFEGNAP FKPRYVLPDY AKFLQNGSEY LELSPAQDLD EALNALTIIY HHVPSVTNIP VYLGQLDDIL LPFCQGLEPE AIYRKLKLFW IMLDRTLPDA FMHVNIGPTD NIVCRTILRV DAELKQIAPN LTFMYDPEIT PDELLQVAAS NICECSKPHI ANYPLHANSF DDKGFGIVSC YNSLPLAGGA NTLVRLNLKQ VALKASSVGD FFTQVLPHYC QLTYELIDAR AKFLHEESNF FNSFLVKEGL IEESRFAPMF GIYGMAEAVN ILQGSPDFNE DNIDKPSSHY GHNAAANALG HKISKALDGI VKSTQVKYGY NGLALLHSQG GISIDKDVTP GVRIPYGTEP NPIAHIQALA EHHQYYTSGI SDILTIDETV KANPQAMMQL CKGALSLGFR EFTANVASND LVRVTGYMIK LSDIASFKAE GSRTNTTWLG AEAAQNTKIL ERQPRVVAHE HTPAYSK
|
| |