| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3939 |
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| Symbol | |
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| ID | 5664323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4787494 |
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| End bp | 4789014 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238603 |
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| Product | flavocytochrome c |
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| Protein accession | YP_001503784 |
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| Protein GI | 157963750 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATA AAGATCTGCT AGGACGCCGT AATTTCATTA AAGGAATTGG CGCAGCTGCA
GGGGTGGCAA TCGCCGCACC AGCTATGGCC GTTTCTGAAA GTGCAAATGG CGTTAAATGG
GACAAAGAAG TTGAAGTCCT AATTATCGGT TCAGGTTTTG CTGGATTGGC TGCTGCAATT
GAAGCGACAC GCAAAGGCGC AAAAGACGTT CATATCTTTG AAAAAATGTC TTACTTTGGT
GGCAACTCAG CCATTAACGG TGGCCTGTTT GCGGCTCCTG ATACGCCAAT GCAAAAGCAA
GAGGGTGTTA AGGACTCTGT CGCCACTATG GTTGCCGATC AGCTAGCGGC AGGCCGTGGT
ATTGCCGATG AGGCGCTACT TCGCCATGTT GCTGAGCACG CTGTCGAAGC ATTGCAGATG
ACTTTAGATG CTGGCTCTGA ATATCACCCT TACCTACAAC AACTTGGTGG CCACTCAGTT
GCGCGTACTT ATCAAACTAC AGTGAGCTGT GGTGCCGGTA TTACTCAGCC GTTACTGCAA
GAATGTCGCA AAATAGGCGT TCACACCCAT AACCGCGCTA AGTTCGACGG CTTCATCTTA
GATGAAAAAG GTGGCGTAGT TGGCGTTAAA ATGCGTGAAG GCTATTACTT CGACAAGCCT
GAATCTGGCG AATTAGTACG TATTAAAGCT AAGCGCGGCG TGATTATGGC GACAGGTGGT
TTTGCGCAAA ACGTTAATAT GCGTATGGCT CAAGATCCAA CCCTAACAGC TGAAGTAGGT
TGTACCAATG CACCAGGCGC TACTGGTGAA GGTATGTTTG AAATGTTCCG TTTAGGTGCG
GTTCCTGTCC ACCTAGCACA TCTCCAGTCT GGCCCTTGGG CATCACCTGA TGAAGGTGGT
TTTGGTTATG TGTCTAACTA CTCTATCTAC AACTTCCCGC ATTCAATCGC GATTGACCGT
TTAAGCGGTA AGCGTTTCAT GAACGAAATC GCTGATCGTA AGACCCGTGC CGATGCTGAG
TTGAACTGCC GTGATGCACA AGGTAATCCA TTACCTCCAA TTCTTATCAC CAGTTATGAA
GACTCGAAAA AGCACCCAAA TACTAAGAAA GTGCTTAAGT ACAATGTGGG TTGGAAGTTT
GACTCAATTG AAGAGTTAGC CAAGCACTTT GAAGTGCCAG TGGCGCCACT TAAGCAGCAA
ATTGCTGAAT ATAACGAATA CGTTAAAACG CAGAACGACC CTCAGTTTGG TAAAAACATG
ACCGAAGCTA AGGGCAAGTA CATCAAGGCG CCATTTACAG TGGTTCGCTT GTGGCCAAAA
GTACATTACT GCCAAGGCGG TGTGCAGATC AATACTAAAG CCGAAGTGAA AGACAGCCTA
ACGGGTCAGT CAATTCCTGG TCTGTACGCA GCGGGTGAAG TATGTGGTGG TATTCACGGC
GTTAGCCGCT TAGGTAGCTG CTCTATTCCT GAGTGTATGG TGATGGGCAT GACCGCAGCC
CGCACTATGA TGCAAGCATA A
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| Protein sequence | MSNKDLLGRR NFIKGIGAAA GVAIAAPAMA VSESANGVKW DKEVEVLIIG SGFAGLAAAI
EATRKGAKDV HIFEKMSYFG GNSAINGGLF AAPDTPMQKQ EGVKDSVATM VADQLAAGRG
IADEALLRHV AEHAVEALQM TLDAGSEYHP YLQQLGGHSV ARTYQTTVSC GAGITQPLLQ
ECRKIGVHTH NRAKFDGFIL DEKGGVVGVK MREGYYFDKP ESGELVRIKA KRGVIMATGG
FAQNVNMRMA QDPTLTAEVG CTNAPGATGE GMFEMFRLGA VPVHLAHLQS GPWASPDEGG
FGYVSNYSIY NFPHSIAIDR LSGKRFMNEI ADRKTRADAE LNCRDAQGNP LPPILITSYE
DSKKHPNTKK VLKYNVGWKF DSIEELAKHF EVPVAPLKQQ IAEYNEYVKT QNDPQFGKNM
TEAKGKYIKA PFTVVRLWPK VHYCQGGVQI NTKAEVKDSL TGQSIPGLYA AGEVCGGIHG
VSRLGSCSIP ECMVMGMTAA RTMMQA
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