| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3936 |
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| Symbol | |
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| ID | 5664320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4784231 |
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| End bp | 4785118 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238600 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503781 |
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| Protein GI | 157963747 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAA TCGAACTATT AGAAAGCTTC ATTGCCGTTG TTGAGTGTGG AAACCTTTCC
AAAGCGGCAG ATAAGCTCTG TCGCACCCAG TCGACAATAA GTTTGCAAAT CAAGAAGCTA
GAAGAAAGTG TGGGTAAACC TTTGCTGTTG CGAGACAACA AAGGCGTCAC TTTGACTGAA
TCAGGCAAGA CGCTACTTAA CTACGCCTAT AAGATGCTAC AGCTCAGTTC TCAAGCAATT
GATGAGCTAA AAGATTGTCA AAATCGTGAA GTGATACGTC TAGGGGTACC GACCGACTAC
ATCAATCGCT ATCTTGGCAG CTTCTTACTA GAGTTTATTC GTGAGTTTAC TTGTATCGAA
TTAGTCATAG ATACCGATGT TAGTGGCAAC CTCTATAAAC GGCTGCATAA CGGCGAGTTT
GATGTGATTG TGGCAACCCA CTGGCAAACA CCGGCGGCTG GCCACGGCGA GTTACTGTTT
GAGCGCCGCT TTCACTGGGT GGCGGCCAAA GGCGGCAGCG CCCATAAACG TGAAACCGTA
CCTATGGCGC TTTATCCAGA GAATTGTCCT ATTCGCGCCC AAGTTTTTGC TAACCACCAG
ATCTCTATGC GTCCAATGAG TGTTTTGCTA TCGACGCCAT CTCCAACCGC CATGTGCATG
GCGGTGGAAA ATGACTTAGT GATCGCGCCC ATCGCCGAAT TCCGCATTAA CGATAAGATG
CAGATCATCG ATCCGATTGA GCATAACATT CCACCACTGC CCACCTTCAA CGAATCTCTG
TACCTCAACC CAGAGACTCA AACGGCAGCG ACTAACCAGC TAATCAACCT GATCAAGGCC
AATGTGCAAG GGCTAGGTGA AGCCAACCAA GCCAATAAGA TGAGTTAA
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| Protein sequence | MLKIELLESF IAVVECGNLS KAADKLCRTQ STISLQIKKL EESVGKPLLL RDNKGVTLTE
SGKTLLNYAY KMLQLSSQAI DELKDCQNRE VIRLGVPTDY INRYLGSFLL EFIREFTCIE
LVIDTDVSGN LYKRLHNGEF DVIVATHWQT PAAGHGELLF ERRFHWVAAK GGSAHKRETV
PMALYPENCP IRAQVFANHQ ISMRPMSVLL STPSPTAMCM AVENDLVIAP IAEFRINDKM
QIIDPIEHNI PPLPTFNESL YLNPETQTAA TNQLINLIKA NVQGLGEANQ ANKMS
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