Gene Spea_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3932 
Symbol 
ID5664316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4780672 
End bp4781154 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content45% 
IMG OID641238596 
Productprotein of unknown function Spy-related 
Protein accessionYP_001503777 
Protein GI157963743 
COG category[T] Signal transduction mechanisms
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport
[P] Inorganic ion transport and metabolism 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.05476e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAA AGAATACGTT AAAAGCAGGT TTGCTTGCCA TAGTGGCCAG CACAGCATTA 
TTAACCGCTG GTGTTAGTGC CGGTGAAAAT AACCACGGCT CCCACGACGG TAAAAACGGT
CATCACCAGA TGAAAGGTGA GCGTGCTGGT CATAATGACA TGCGCAAGAT GTTCCGCGGT
TTAGACTTAA CCGATGAGCA GAAGACTGAG ATGAAAGCGC TATTTAGTGC TCATCGTGAC
GAGATGAAAC AGGATCGTCC TTCTAAAGAA GCACGCGCTG CACAAAAACA GCAGATGCTA
GACTTTATTA CCACGACTAA CTTTAGCGAA GCTGATGTGA AGCAGGCATT AGCCGCTAAG
CAAGAGGCGC GTCAACAGAA GGCTGTCGGT ATTATTAAGT TACAAAACCA AGCGTATCAG
TTGCTAACAC CAGAGCAGCA AGAGAAATTT AAACAGCGTT TTGCTAAGCA TCATAAAAGA
TAA
 
Protein sequence
MMKKNTLKAG LLAIVASTAL LTAGVSAGEN NHGSHDGKNG HHQMKGERAG HNDMRKMFRG 
LDLTDEQKTE MKALFSAHRD EMKQDRPSKE ARAAQKQQML DFITTTNFSE ADVKQALAAK
QEARQQKAVG IIKLQNQAYQ LLTPEQQEKF KQRFAKHHKR