Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3915 |
Symbol | |
ID | 5664299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4762221 |
End bp | 4764050 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641238579 |
Product | GTP-binding protein TypA |
Protein accession | YP_001503760 |
Protein GI | 157963726 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAGAG GTTTAGCCGT GTTAGAGAAT TTACGTAACA TCGCCATTAT TGCACACGTT GACCATGGTA AGACTACCTT GGTTGATAAG TTGCTGGCGC AGTCAGGAAC CCTTGAGTCT CGAGGAGAAG CCACTGAGCG GGTGATGGAT TCAAATGATC TTGAAAAGGA ACGTGGTATC ACGATTCTGG CCAAGAACAC TGCCATCAAG TGGAACGATT ACCGTATCAA CATCGTTGAT ACCCCTGGTC ACGCCGATTT CGGTGGTGAG GTAGAGCGTG TTCTATCTAT GGTTGACTCA GTATTACTAC TAGTTGACGC AGTTGATGGT CCAATGCCAC AGACTCGCTT CGTGACTAAG AAAGCTTTCG CTCAAGGTCT AAAGCCAATC GTTGTTATCA ACAAGATTGA CCGTCCAGGC GCACGTCCAG ATTGGGTTAT TGACCAAGTA TTTGACTTGT TCGACAACCT AGGCGCTACC GATGAGCAAC TAGATTTCCC AATCGTTTAT GCTTCTGCGC TAAACGGTTT TGCTACATTA GATCCAGACG AAGTTAGCGC TGACATGACG CCGCTATTCG AAACGATCGT TGAAAAAGTT TCTTCACCAG ATGCTGATGC TGAAGGTGAT TTCCAGATGC AAATTTCGCA AATCGACTAC AACTCATACG TGGGTGTTAT CGGTATTGGC CGCATCAAGC GTGGTAGTGT TAAAACTAAC CAACAAGTGA CTATTCTTGG CGCTGACGGC AAGAAGCGTA ACGGTAAAAT CGGTCAAGTA TTAGGTTACA TGGGCCTTGA GCGTCATGAA GTTTCTGATG CAACTGCTGG TGACATCGTT GCGATTACTG GTCTTGGCCA GTTGCTAATT TCTGACACTG TTTGTGCAAC TACTAACGTA GAAGCGCTAC CTCCATTGTC TGTTGATGAG CCAACACTAA CCATGACTTT CCAGGTGAAC ACTTCTCCGT TCGCTGGTAA AGAAGGTAAG TACGTGACTT CACGTAATAT CCTTGAGCGT CTACAGCAAG AACTAGTACA CAACGTAGCA TTGCGCGTTG AAGAAACTGA CAGCCCAGAT CGTTTCCGCG TATCAGGCCG TGGTGAACTT CACCTTTCAA TCTTGATTGA AAACATGCGT CGTGAAGGTT ACGAGCTAGC TGTATCTCGT CCAGAAGTTA TCGTTAAAGA GATCGATGGC GAGATGTGTG AGCCGTTCGA AACACTAACT GTTGACGTTC AAGAAGAACA TCAAGGTGCA GTGATCGAGA AGCTTGGTAT CCGTAAGGGT GACATGAAGG ACATGCAGTT AGACGGTAAG GGTCGTGTAC GTATCGATTT CGTTATCCCT AGCCGTGGTC TAATCGGTTT CCAAACTGAG TTCATGACAG CGACTTCTGG TACTGGTCTA ATTTACCATT CATTCGACCA TTACGGTCCA TTGAAAGGTG GTGACATTGG TCAACGTGCT CGTGGCGTAT TGATCTCTAA CGCTACTGGT AAAGCACTAA CATTCGCACT ATTCGGTCTA CAAGAGCGTG GTCGTCTGTT TATTACTCAC GCTACAGAAG TATACGAAGG CCAAGTAGTT GGTCTTCACG CACGTGCTAA CGACCTAACA GTTAACTGTT TGAAAGGTAA GCAGCTAACT AACATGCGTG CATCTGGTAC TGACGAAGCT CAAGTACTAA CTCCGCATAT CGAAATGACA CTTGAGCAAG CTCTTGAGTT CATCGATGAT GACGAATTAG TAGAAGTAAC GCCACTGAAC ATCCGTGTTC GTAAGCGTTT CTTGACTGAA AACGAGCGTA AGCGTCATAA CCGTAAGTAA
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Protein sequence | MVRGLAVLEN LRNIAIIAHV DHGKTTLVDK LLAQSGTLES RGEATERVMD SNDLEKERGI TILAKNTAIK WNDYRINIVD TPGHADFGGE VERVLSMVDS VLLLVDAVDG PMPQTRFVTK KAFAQGLKPI VVINKIDRPG ARPDWVIDQV FDLFDNLGAT DEQLDFPIVY ASALNGFATL DPDEVSADMT PLFETIVEKV SSPDADAEGD FQMQISQIDY NSYVGVIGIG RIKRGSVKTN QQVTILGADG KKRNGKIGQV LGYMGLERHE VSDATAGDIV AITGLGQLLI SDTVCATTNV EALPPLSVDE PTLTMTFQVN TSPFAGKEGK YVTSRNILER LQQELVHNVA LRVEETDSPD RFRVSGRGEL HLSILIENMR REGYELAVSR PEVIVKEIDG EMCEPFETLT VDVQEEHQGA VIEKLGIRKG DMKDMQLDGK GRVRIDFVIP SRGLIGFQTE FMTATSGTGL IYHSFDHYGP LKGGDIGQRA RGVLISNATG KALTFALFGL QERGRLFITH ATEVYEGQVV GLHARANDLT VNCLKGKQLT NMRASGTDEA QVLTPHIEMT LEQALEFIDD DELVEVTPLN IRVRKRFLTE NERKRHNRK
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