Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3909 |
Symbol | rbn |
ID | 5664293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4754959 |
End bp | 4755981 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641238573 |
Product | ribonuclease BN |
Protein accession | YP_001503754 |
Protein GI | 157963720 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAATA AGATAGCGAT AAATCAGGTT CGTTCTTTTT TACTGAGCAT TTGGGCATTT TTCTTACATC TACTCAGTCG CTTCAAAGAG GACCAAGTCA ATATTAAGGC CGGGCACTTG GCTTATGTGA CCTTATTATC TTTGGTGCCT ATTGTGGCTG TGATGTTTTC TATGTTGTCC GCTTTCCCCG TATTTTCAGG TATTCGTGAA AAGTTAGAGG GTTTTGTCTA CGACAACTTT CTGCCAGCCG CTGGCGATAC GGTGCAGATC TACATCAATG AATTTGTCGC TAACGCATCT AAGGGCACGA GTGTGGGGAT CGTGGCGTTA ATGGTGGTGG CACTGATGCT GATCTCGGCT ATCGATAAGG CGCTCAACAG TATTTGGCGC ACCAAAGAGA AGCGTCAGGC TGCGGTGTCT TTTTCCATGT ATTGGATGGT GCTGACTTTA GGGCCTGTAC TCGTGGGCGC CAGCTTGGTG GCGACATCCT ATATTGTGTC ATTAAAGTTA TTTAGTGAAA CCGAGCTTTC AGGTGTGGTG CCAATACTGA TAGAGCGTTT ACCTATGCTA TTTTCAGTGG CCGCCTTCTT GCTCCTGTAT ATGGTCGTTC CGATTAAAAA GGTTAAGTTT CTGCATGCCT TGCTAGGTGC GTTAGTCGCA GCCATGCTGT TTGAGCTAGG CAAGAAAGGC TTTGCCTTTT ACGTGACTCA ATTCCCCAGT TACGAGGCGA TTTATGGTGC CTTAGCGACC ATTCCTATCC TGTTTGTTTG GGTCTATGTT TCTTGGGTCA TCGTACTCGT CGGCGCAGAA ATAACCGCAG GACTACCTGA GTACCTGCAT GAGTGTAAGT TGATCCGTGA AACCGCGTTA GCGGAATCTC AAGCAGAAAC TAAAACCGAA GAGCCGGTGA CTGAATCAAA GAATGATGGC CCAAATAGTA GCAATGATAG TGGTCAAGAC AACGTCAGAG GCAGTGAGAA AACTGATGAG CCAGCCCAAG ATAAACAGGA CAAGCTGGAT TAA
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Protein sequence | MKNKIAINQV RSFLLSIWAF FLHLLSRFKE DQVNIKAGHL AYVTLLSLVP IVAVMFSMLS AFPVFSGIRE KLEGFVYDNF LPAAGDTVQI YINEFVANAS KGTSVGIVAL MVVALMLISA IDKALNSIWR TKEKRQAAVS FSMYWMVLTL GPVLVGASLV ATSYIVSLKL FSETELSGVV PILIERLPML FSVAAFLLLY MVVPIKKVKF LHALLGALVA AMLFELGKKG FAFYVTQFPS YEAIYGALAT IPILFVWVYV SWVIVLVGAE ITAGLPEYLH ECKLIRETAL AESQAETKTE EPVTESKNDG PNSSNDSGQD NVRGSEKTDE PAQDKQDKLD
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