Gene Spea_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3882 
Symbol 
ID5664266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4727800 
End bp4729455 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content47% 
IMG OID641238546 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001503727 
Protein GI157963693 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.6311e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCTT CTATGAAAAC CCCAATTGAA ATGCTCGAAC ATTGGGTTGA AAAACAAGGT 
GATCAAGTTT ACCTAAAGCA ACCTATTGAC GGCCAATATA AGACTTTTAC TTGGCGTGAT
GTACAAACCA AGATGCAGCA GATTGCAGGC GCATTGAGAC ACCTTGGCCT CAATCCTGGT
GACAAAGTTG CCGTGCTTTC TAAAAACTGT GCCGAATGGT TTATTACTGA TTTAGCCCTG
ATGCACGGCG GCTATATTAG TGTCCCCATC TACCCTACCG CTAACGCAGA CACTATTCGC
TACACCCTAG AGCACAGTGA AGCTAAGGCA ATTTTTATCG GTAAGCTCGA TTATTGGGCC
GATCAAGAAG CGGGTGTTGG CGGCGATATT CTGCGTATTG CTATGCCGTA CGACACCATG
CCATCTCAGT ATCATTGGGA TAAGATGCTC AATATGGGCC AGCCTTTAAT TGATGCGCCG
CTGCCAACAC CTGAGCAAGT GATGACCATC ATCTATACAT CAGGCTCGAC TGGTAAGCCT
AAAGGTGCGA TTCAAAATTT TGCCAGCTAT GCCTGGACTT GCACAGCGGT AGTACGCGAC
CTTAAAACAG ACGTCGAAGA CAGATTACTG TCTTACTTGC CACTGGCACA TATTACCGAG
CGTGTCGCGA TTCAAGGTTC TTCTTTCTAC TCAGGTAGTA GTGTTGCCTT CGTCGAGAGC
CTAGATAGCT TCGTTGCCGA CGTGCAGCGT GCAAGACCCA CAGTATTCTT CTCAGTGCCA
CGCCTGTGGA GCCTATTCCA GAAAAATATT ATCGATAAGA TTGGCTATAG CAAGCTTAAC
TTTTTGCTTA AAGTGCCGAT CATTAGCAGC ATAGTAAAAC GTAAAATTCA TCAAGGTTTA
GGTCTAGAGC ACTGCCACCT GCTCGGCTCA GGTTCTGCGC CGATCCCGCC ATCACTGGTT
GAGTGGTATC ACAAGATTGG TCTCGATATC AGTGAGGCTT GGGGCATGAC CGAAAACTGC
GCCTACTCAA TTATTAACTA CCCATTTGAT GCCCGTAAAA TTGGCTCCGT TGGCCGTGCG
GTCGAAGGCT GTGAAGCCAA GTGTTCGGAT GTTGGTGAGC TGCTAGTTAA GAGCCCAGGC
CTAATGCAAG GTTATTACAA GCAAGAGGAA GAGACAGCTA AGAGCTTCGA TGACGATGGC
TTCTTCCACA CTGGTGATCT CTGCTCTATC GATGATGAGG GCAACGTCAG CATTACTGGC
CGTGTTAAGG ATAACTTCAA GACTTCGAAA GGTAAGTATG TTGCTCCAGT ACCGATTGAG
CGCAAATTGG CACAAGATCC TCACATAGAG ATGATCTGTG TTATCGGCTC AGGCCTGCCA
CACCCAATTG CCTTAGTGCA ATTGTCTGAA GGCGCTACAC TGCAACCTAG GGAAGAAGTA
AGGCTATCGC TGAAAAACAC CATAGATGCG GTAAACCCAC ACCTAGAGTC ACATGAAACA
GTCGATGCTA TCGTTATTGT GAATGAAGCT TGGGATGTTG AAAATGACGT ACTCACTCCA
ACCCTTAAGA TTAAACGCCA TGTGCTTGAG AAGAAGTTTA GTGAGAAGGT CGACGGCATT
CGTGGCGGAA AAGTTTGCTG GGAAGATGAA ATCTAA
 
Protein sequence
MESSMKTPIE MLEHWVEKQG DQVYLKQPID GQYKTFTWRD VQTKMQQIAG ALRHLGLNPG 
DKVAVLSKNC AEWFITDLAL MHGGYISVPI YPTANADTIR YTLEHSEAKA IFIGKLDYWA
DQEAGVGGDI LRIAMPYDTM PSQYHWDKML NMGQPLIDAP LPTPEQVMTI IYTSGSTGKP
KGAIQNFASY AWTCTAVVRD LKTDVEDRLL SYLPLAHITE RVAIQGSSFY SGSSVAFVES
LDSFVADVQR ARPTVFFSVP RLWSLFQKNI IDKIGYSKLN FLLKVPIISS IVKRKIHQGL
GLEHCHLLGS GSAPIPPSLV EWYHKIGLDI SEAWGMTENC AYSIINYPFD ARKIGSVGRA
VEGCEAKCSD VGELLVKSPG LMQGYYKQEE ETAKSFDDDG FFHTGDLCSI DDEGNVSITG
RVKDNFKTSK GKYVAPVPIE RKLAQDPHIE MICVIGSGLP HPIALVQLSE GATLQPREEV
RLSLKNTIDA VNPHLESHET VDAIVIVNEA WDVENDVLTP TLKIKRHVLE KKFSEKVDGI
RGGKVCWEDE I